Gene Information

Name : KOX_02335 (KOX_02335)
Accession : YP_005016447.1
Strain : Klebsiella oxytoca KCTC 1686
Genome accession: NC_016612
Putative virulence/resistance : Unknown
Product : Integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 495456 - 496646 bp
Length : 1191 bp
Strand : -
Note : COG0582 Integrase

DNA sequence :
ATGAAGCTGACAGCTCGTCAGGTTGAAACTGCAAAACCCAAAGAGAAGCCCTACAAACTGGCTGATGGTGGTGGTCTTTA
CCTGCTGGTTAATCCCAACGGCAAAAGATACTGGCGTCTCAAATACCGTTCACTAGGTAAAGAGAAACTGCTCGCTATCG
GCGTTTACCCTGATGTTTCTTTAGCTGAAGCCCGAAGTAAGCGTGAGGATGCTAAAAGGACATTATCCGCAGGTAACGAT
CCTTCTCTTGAACGAAAAATTGAGAAACTTAGTCGTCAACAAGACGCAGAAAACTCTTTTGAGGCTATCACGCGGGAGTG
GTATCAGCGTCGCTATGACCGCTGGTCTGTCTCCTATCGTGAAGAGATGATGCGAACCTTTGAGAAAGATGTATTTCCTT
ATATCGGTCACCGGCCAATCAAAGATATCAAGCCGATGGAGTTGCTTGCAGTTCTTTCAAAGATAGAAGCTCGAGGGGCA
ACTGAGAAGGTCCGTAAGGTTCGCCAGCGCTGTGGAGAGGTCTGGAAGTATGCTGTTGTGACTGGCAGGGCCGAGTACAA
TCCAGCACCTGATTTAGCCAGTGCAGTAACTCCTCATGAAAAAGAACACTATGCTTTTTTAACCCAGGATGAATTGCCTG
AGTTTCTTCGGACTCTGAACACCTATGCTGGTAGTGTGCTTGTTAAGATTGCGATGCAATTGCTTATTTTAACCGGAGTA
AGGCCTGGGGAGTTGAGGCAAGCGGAGTGGCAGGAATTTGATTTTGAGAAAAAGGTTTGGAATGTACCAGCGGAACGCAT
GAAAATGCGCCGCCCTCATCTGGTTCCGTTATCAAGCCAGGCAATTGACCTACTTAATCAGCTTAAACCCATGACGGGAG
CAGGAGCGTTGCTGTTCCCAGGACGTAATGATCCTAAGAAACCGATGAGTGATATGGCATTGACTGTGTTGGTCAGGCGT
ATCGGCTATGCCGGGCGCGTTACAGGGCATGGATTCCGCCACACGATGAGTACCATTTTGCATGAGCAGGGTTTCAATTC
GGCCTGGATTGAGTTACAGCTGGCTCACGTCGATAAGAACTCAATTCGTGGGACGTATAACCATGCGCAGTATCTGGATG
GGAGGAGGGAGATGATGCAGTGGTATGGCGAGTTGTTATCTTTTATGTGTGATGTAGGTACATTAAAATAA

Protein sequence :
MKLTARQVETAKPKEKPYKLADGGGLYLLVNPNGKRYWRLKYRSLGKEKLLAIGVYPDVSLAEARSKREDAKRTLSAGND
PSLERKIEKLSRQQDAENSFEAITREWYQRRYDRWSVSYREEMMRTFEKDVFPYIGHRPIKDIKPMELLAVLSKIEARGA
TEKVRKVRQRCGEVWKYAVVTGRAEYNPAPDLASAVTPHEKEHYAFLTQDELPEFLRTLNTYAGSVLVKIAMQLLILTGV
RPGELRQAEWQEFDFEKKVWNVPAERMKMRRPHLVPLSSQAIDLLNQLKPMTGAGALLFPGRNDPKKPMSDMALTVLVRR
IGYAGRVTGHGFRHTMSTILHEQGFNSAWIELQLAHVDKNSIRGTYNHAQYLDGRREMMQWYGELLSFMCDVGTLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int CAC39282.1 integrase Not tested LPA Protein 1e-130 64
aec33 AAW51716.1 Int Not tested AGI-3 Protein 6e-131 64
ESA_03025 YP_001439090.1 hypothetical protein Not tested Not named Protein 2e-124 64
int AAC31482.1 CP4-like integrase Not tested LEE Protein 4e-131 63
int ACU09430.1 integrase Not tested LEE Protein 4e-131 63
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 6e-131 63
ECs4534 NP_312561.1 integrase Not tested LEE Protein 6e-131 63
int AAD44730.1 Int Not tested SHI-2 Protein 6e-129 63
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 2e-128 63
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 2e-128 63
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 1e-128 63
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 3e-118 58
STY4821 NP_458899.1 integrase Not tested SPI-10 Protein 2e-76 44
SESS1635_03816 AFO66367.1 bacteriophage integrase Not tested SESS LEE Protein 3e-75 43
SESS1296_03598 AFO66301.1 bacteriophage integrase Not tested SESS LEE Protein 3e-75 43
ECO111_3718 YP_003236059.1 putative integrase Not tested LEE Protein 2e-73 41
APECO1_3534 YP_854214.1 P4-like integrase Not tested PAI I APEC-O1 Protein 7e-76 41
ORF_1 AAZ04412.1 phage integrase Not tested PAI I APEC-O1 Protein 5e-76 41
c5216 NP_757064.1 prophage P4 integrase Not tested PAI II CFT073 Protein 1e-75 41
int AAL51003.1 CP4-like integrase Not tested LEE Protein 1e-75 41
int AAT48697.1 CP4-like integrase Not tested PAI I 4787 Protein 1e-75 41
int AAK16198.1 Int Not tested PAI-I AL862 Protein 3e-76 41
int ADD91747.1 P4 integrase Not tested PAI-I AL862 Protein 3e-76 41
c3556 NP_755431.1 prophage P4 integrase Not tested PAI I CFT073 Protein 9e-76 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KOX_02335 YP_005016447.1 Integrase VFG0783 Protein 2e-131 63
KOX_02335 YP_005016447.1 Integrase VFG0598 Protein 7e-129 63
KOX_02335 YP_005016447.1 Integrase VFG1693 Protein 4e-76 41