Gene Information

Name : KOX_22530 (KOX_22530)
Accession : YP_005020465.1
Strain : Klebsiella oxytoca KCTC 1686
Genome accession: NC_016612
Putative virulence/resistance : Virulence
Product : type VI secretion protein EvpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4850271 - 4851809 bp
Length : 1539 bp
Strand : -
Note : COG3517 Uncharacterized protein conserved in bacteria

DNA sequence :
ATGCTGATGTCTGTAAATACTGAAACCGCCCCCGCGCAGGGGCAGACCGCTGTACTGGAAAAAGAGAGCGTTTACGCTTC
CCTGTTTGACAAAATCAACCTGACCCCGGCGTCCCGCCTGGGCGATATTAACGACTTTCTGGATGATGCCGCGCTGTCCG
ACGCCCCGGCGGGCGAACGACTGACGGCGGCGATGCAGGTGTTTATGGACTGCATCCGTCAGTCCAGAAAGACCGTGGAG
AAGCTCGACAAGACCCTGATTGACCACCATATCGCGGAGCTGGACTATCAAATCAGCCGCCAGCTGGACGCGGTGATGCA
CCATCCTGAGTTCCAGAAGGTGGAATCCCTGTGGCGCGGCCTGAAGCAGCTGGTGGACAGCACCGACTACCGCCAGAACG
TCAAAACCGAAATTCTGGACGTCTCCAAAGACGATCTGCGCCAGGACTTCGAAGACGCGCCGGAGCTGATTCAGAGCGGT
CTCTACTGGCACACCTACACCGCCGAGTACGACACCCCGGGCGGCGAGCCGATTGGCTCGGTGATCTCCGCGTATGAGTT
CGACGCCAGCCCGCAGGACGTGGCGCTGCTGCGCAACATCTCCGGCGTCTCCGCCGCGGCGCATATGCCGTTTATTGGCG
CCGTCGGCCCGGCCTTCTTTCTGAAAGAGTCCATGGAAGAGGTTGCCGCCATCAAGGATATCGGCAACTACTTCGACCGC
GCCGAGTACATCAAATGGAAATCCTTTCGCGACACCGACGACGCGCGCTATATCGGCCTGGTGATGCCGCGCGTGCTGGG
CCGCCTGCCGTATGGACCGGACACCGTGCCGGTGCGCAGCTTCAACTACGTCGAGCAGGTGAAAGGCCCGGACCATGAGA
AATACCTGTGGACCAGCGCCTCGTTCTCCTTCGCGTCCAATATGGTGAAAAGCTTTATTAATAACGGCTGGTGCGTGCAG
ATCCGTGGCCCGCAGGCGGGCGGAGCGGTGAAAGATCTGCCGATCCACCTCTACGATCTGGGCACAGGCAACCAGGTGAA
GATCCCGTCGGAGGTGATGATCCCGGAAACCCGCGAGTTTGAGTTCGCCAGCCTCGGCTTTATCCCGCTGTCGTACTACA
AAAACCGCGACTATGCCTGCTTCTTCTCGGCCAACTCCGCCCAGAAGCCGGCGCTGTACGACACCGCCGACGCCACCGCC
AACAGCCGCATCAACGCGCGCCTGCCGTATATCTTCCTGCTGTCGCGCATTGCGCACTACCTGAAGCTCGTTCAGCGTGA
AAACATCGGCACCACCAAGGATCGCCGCCTGCTGGAGCTGGAGCTCAACACCTGGGTGCGCGGTCTGGTGACGGAGATGA
CCGACCCGGGCGACGAGCTGCAGGCCTCGCATCCGCTGCGCGACGCGAAGGTGGTGGTGGAAGATATCGAGGACAATCCG
GGCTTCTTCCGGGTGAAGCTGTACGCGGTGCCGCACTTCCAGGTGGAAGGGATGGACGTGAACCTGTCTCTGGTTTCTCA
GATGCCAAAGGCGAAATAA

Protein sequence :
MLMSVNTETAPAQGQTAVLEKESVYASLFDKINLTPASRLGDINDFLDDAALSDAPAGERLTAAMQVFMDCIRQSRKTVE
KLDKTLIDHHIAELDYQISRQLDAVMHHPEFQKVESLWRGLKQLVDSTDYRQNVKTEILDVSKDDLRQDFEDAPELIQSG
LYWHTYTAEYDTPGGEPIGSVISAYEFDASPQDVALLRNISGVSAAAHMPFIGAVGPAFFLKESMEEVAAIKDIGNYFDR
AEYIKWKSFRDTDDARYIGLVMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHEKYLWTSASFSFASNMVKSFINNGWCVQ
IRGPQAGGAVKDLPIHLYDLGTGNQVKIPSEVMIPETREFEFASLGFIPLSYYKNRDYACFFSANSAQKPALYDTADATA
NSRINARLPYIFLLSRIAHYLKLVQRENIGTTKDRRLLELELNTWVRGLVTEMTDPGDELQASHPLRDAKVVVEDIEDNP
GFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 4e-100 44
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 3e-100 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KOX_22530 YP_005020465.1 type VI secretion protein EvpB VFG2475 Protein 1e-110 47
KOX_22530 YP_005020465.1 type VI secretion protein EvpB VFG2093 Protein 5e-108 43
KOX_22530 YP_005020465.1 type VI secretion protein EvpB VFG2070 Protein 7e-85 42