Gene Information

Name : KOX_22310 (KOX_22310)
Accession : YP_005020421.1
Strain : Klebsiella oxytoca KCTC 1686
Genome accession: NC_016612
Putative virulence/resistance : Virulence
Product : chaperone protein FimC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4801283 - 4801972 bp
Length : 690 bp
Strand : +
Note : COG3121 P pilus assembly protein, chaperone PapD

DNA sequence :
ATGCATAAAGGATATAGAGTATTTCCCCTCCTCCTTCTGGTGCTGGCGAGCGAATTAGCGGCGGCGACAGAAAGCGGCGG
CGTCACTATTGGCGGCACGCGACTGATTTTTGATGGCGGCAAAAAAGAGGCCTCTTTAAGCGTCAGCAATTCGGATACCG
GCCCATATCTGATCCAGTCGTGGGTGGAGCCGAACAATAACGATCCGGCCAGGCCGCCGTTTATTATTACCCCGCCGCTG
TTCCGCCTCGACGGCAATCAGCAAAACCTGCTGCGGATCGTCAATACCGGCGGCCAGCTCCCAACCGATCGCGAGTCGCT
TTATTGGCTAAACGTCAAAGCTATTCCGACAAATACCGCCCCGGAAAACGCGAATACGTTGCAAATCGCCGTAAGGACGC
GCCTCAAGCTTATTTATCGCCCCAACACGCTGAAGGGTATCCCGGAAGAGGTGACCCATAAGCTGCGATGGCGCCAGACG
GGCAGCAGGCTAACGGTATCGAATCCGACGCCGTTTTACATGAATTTCAACGAGGTCACGGTGGGCAATCATCCCATTAC
CGAAGCCACCTTTGTCGCACCAATGAGCTCAGCCACGTTTGCTACCCCCGGCAAGGTGACCGGCCTGGTGTCATGGAAAA
TCATTAACGACTTTGGCGGCGTGGGTAAAAGCCACACGCAGGTTCGCTAA

Protein sequence :
MHKGYRVFPLLLLVLASELAAATESGGVTIGGTRLIFDGGKKEASLSVSNSDTGPYLIQSWVEPNNNDPARPPFIITPPL
FRLDGNQQNLLRIVNTGGQLPTDRESLYWLNVKAIPTNTAPENANTLQIAVRTRLKLIYRPNTLKGIPEEVTHKLRWRQT
GSRLTVSNPTPFYMNFNEVTVGNHPITEATFVAPMSSATFATPGKVTGLVSWKIINDFGGVGKSHTQVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
safB NP_454906.1 periplasmic fimbrial chaperone protein Not tested SPI-6 Protein 2e-45 46
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 4e-40 43
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 3e-35 43
afaB AAK16197.1 AfaB Virulence PAI-I AL862 Protein 4e-32 41
afaB ADD91742.1 putative AfaB-VIII periplasmic chaperone Not tested PAI-I AL862 Protein 4e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KOX_22310 YP_005020421.1 chaperone protein FimC VFG0455 Protein 1e-39 48
KOX_22310 YP_005020421.1 chaperone protein FimC VFG0911 Protein 1e-35 44
KOX_22310 YP_005020421.1 chaperone protein FimC VFG1644 Protein 2e-35 43
KOX_22310 YP_005020421.1 chaperone protein FimC VFG0875 Protein 5e-40 42