Gene Information

Name : KOX_02180 (KOX_02180)
Accession : YP_005016416.1
Strain : Klebsiella oxytoca KCTC 1686
Genome accession: NC_016612
Putative virulence/resistance : Virulence
Product : GTPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 460493 - 461368 bp
Length : 876 bp
Strand : -
Note : COG3596 Predicted GTPase

DNA sequence :
ATGCAAAAATCTGACGGCCTTCTGGCCATTGAGAAGCCTCTGGCTTCACTGCCCCATACTCTTCGCAGTCTAATTCTTAA
ACGCCTTCGTAGTCTCACACAGTACGAGCCGGTTATTGGCATTATGGGCAAAAGTGGGGCAGGCAAATCGTCTCTCTGCA
ATGCCCTGTTCCAGGGAGAAGTCACGTCGGTCAGCGATGTGGAGGCCTGCACCCGCGATGTGCTGCGCTTCAGGCTCCGC
AATGGCAATCACAGCCTGATGATTGTTGATTTACCTGGTGTGGGTGAAAGCGAGCAACGCGATGAAGAATACACTGCACT
GTATCGCCGCATCCTACCCGAACTGGATTTAGTGTTATGGGTCATCAAGGCTGATGATCGGGCACTGTCAGTGGATGAAC
ACTTCTATCGCAAGGTGATGCTGGCGTATCAGTACCGGGTTTTGTTCGTGGTTAATCAGGTCGACAAGGCCGAACCCTGT
CATGAATGGTGTACCACCGATAGCACGCCTTCACCTGCTCAGCAGTTAACGATTGAGACTAAGAGAATCGCGATGCAGCA
GTTGTTCCTGCCGCACCATCCTGTCTGTGTGGTGTCAGCCCGCACAGGGTGGGGCGTGGAAACCCTTGTCGATACTATGA
TGCATAGCCTGCCTGACCGGGCCACCAGTCCACTGACAACACAACTGCATGGAAGGCTCTGCACCGAGCCGGTAAAAAAG
CAGGCACGTGAGCGCTTTGGTCATGCAGTTGATGAAATGATTGGCAATGTGGAGTCATCATCTTTTCTGCCAGCGCCTGT
AAGGGCTGTGATTCGAACCGTGCGGGAAGCCGTGGTGACCGTTGCCCGTGCCGTCTGGGACTGGATTTTCTTCTGA

Protein sequence :
MQKSDGLLAIEKPLASLPHTLRSLILKRLRSLTQYEPVIGIMGKSGAGKSSLCNALFQGEVTSVSDVEACTRDVLRFRLR
NGNHSLMIVDLPGVGESEQRDEEYTALYRRILPELDLVLWVIKADDRALSVDEHFYRKVMLAYQYRVLFVVNQVDKAEPC
HEWCTTDSTPSPAQQLTIETKRIAMQQLFLPHHPVCVVSARTGWGVETLVDTMMHSLPDRATSPLTTQLHGRLCTEPVKK
QARERFGHAVDEMIGNVESSSFLPAPVRAVIRTVREAVVTVARAVWDWIFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1210 NP_286745.1 histone Not tested TAI Protein 2e-69 63
Z1650 NP_287153.1 hypothetical protein Not tested TAI Protein 2e-69 63
sap NP_708764.1 hypothetical protein Not tested SHI-1 Protein 5e-68 62
unnamed AAK00473.1 unknown Not tested SHI-1 Protein 4e-68 62
ECO103_3582 YP_003223441.1 hypothetical protein Not tested LEE Protein 3e-68 62
sap NP_838477.1 hypothetical protein Not tested SHI-1 Protein 2e-68 62
unnamed AAL99256.1 unknown Not tested LEE Protein 1e-68 62
unnamed AAL08471.1 unknown Not tested SRL Protein 1e-68 62
unnamed CAD66199.1 hypothetical protein Not tested PAI III 536 Protein 6e-69 62
aec64 AAW51747.1 Aec64 Not tested AGI-3 Protein 2e-68 62
yeeP ADD91709.1 YeeP Not tested PAI-I AL862 Protein 2e-68 62
APECO1_1093 YP_853113.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 3e-67 62
yeeP CAE85196.1 YeeP protein Not tested PAI V 536 Protein 3e-68 62
unnamed CAD42093.1 hypothetical protein Not tested PAI II 536 Protein 7e-43 42
unnamed AAL67395.1 unknown Not tested PAI II CFT073 Protein 2e-42 41
APECO1_3493 YP_854318.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-42 41
ORF_43 AAZ04452.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-42 41
c5162 NP_757010.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-42 41
unnamed CAD33781.1 hypothetical protein Not tested PAI I 536 Protein 2e-42 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KOX_02180 YP_005016416.1 GTPase VFG1062 Protein 6e-69 62
KOX_02180 YP_005016416.1 GTPase VFG0654 Protein 2e-68 62
KOX_02180 YP_005016416.1 GTPase VFG1674 Protein 3e-69 62
KOX_02180 YP_005016416.1 GTPase VFG1612 Protein 4e-43 42
KOX_02180 YP_005016416.1 GTPase VFG1522 Protein 1e-42 41