Gene Information

Name : KOX_20615 (KOX_20615)
Accession : YP_005020084.1
Strain : Klebsiella oxytoca KCTC 1686
Genome accession: NC_016612
Putative virulence/resistance : Virulence
Product : yersiniabactin-iron ABC transporter permease ATP-binding protein YbtQ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4453961 - 4455763 bp
Length : 1803 bp
Strand : -
Note : COG1132 ABC-type multidrug transport system, ATPase and permease components

DNA sequence :
ATGAAAGACACTAACCCGGCGGATAATCTGGCCTGGCGCGCGATCTGGCGCCAGCTTATCTCCAGCGTGGGCAGTCAGGC
GGGAACGCTGCGGCGCAGTCTGGTTGCTCTGCTGCTGGCGGCATTGATGCAGGGGATCGCCTTCGCCTGTCTCTATCCGA
TCGTTGATGCGCTGCTACGGAATGAAGCATCGCGGCTTCTTCACTGGGCTTTGGCCTTCAGCATTGCGGCGTTGGTGACG
CTGGCGCTCCGCTGGTATGGGCTGGGCTTTGAATACCGCGGGCATCTGGCGCAGGCCACCCATGAGCTGCGCCTGCGCCT
GGGCGAACAATTACGCCGCGTGCCGCTGGAGAGGCTCCAGCGCGGCAGAGCGGGCGAAACGAACGCCTTGTTGCTGGGCT
CCGTGGATGAAAACCTAAATTATGTGATTGCGATAGCCAATATTTTACTGCTGACCATCGTCACGCCGCTGACGGCGTCG
CTGGCGACATTGTGGATCGACTGGCGGCTGGGGCTGGTGATGCTGCTGATCTTCCCCTTGCTGGCGCCGTTTTATTACTG
GCGCCGCCCGGCGATGCGTCGACAAATGCAGACCCTGGGCGAAGCGCACCAGCGGCTGAGCGGGGATATTGTTGAATTTG
CGCAGGGGATGATGGTATTGCGTGCCTGCGGTAGCGATGCCGATAAAAGCCGGGCGCTGCGGGATCATTTTAATGCTCTG
GAAAACTTACAGACCCGCACTCACCGCCAGAGCGCGGGCGCGACGATGCTGATCGCCGGCGTTGTGGAGCTGGGACTACA
GGTGGTGGTGTTATGCGGAATTATCTGGGTGGTCACGGGCACATTGAACCTCGCCTTTCTGATTGCCGCCGCCGCGATGA
TTATGCGTTTTGCTGAACCGATGGCCATGTTTATCAGCTACACCTCGGTGGTGGAACTGATTGCCAGCGCCTTACAGCGT
ATTGAGCAATTTATGGCGATCGCGCCGCTTCCCGTTGCCGAACGCGGGGAGATGCCGGAATGTTACGATATCCGCTTTGA
CAATATTCATTACCGCTATGACGACAGCGGCGATCCCGCGCTCAATGACCTCTCTTTGACCTTTCCGGCGGCCAGTATGA
GCGCGCTGGTGGGCGCTTCCGGCGCAGGTAAAACCACGGTCAGCAAACTGTTAATGCGCTATGCCGATCCGCAGCAAGGG
CGGATTTCTATCGGCGGCGTCGATATTCGTCGCCTGACGGCGGAGCAGCTCAACAGCCTGATTTCCGTCGTTTTCCAGGA
TGTCTGGCTGTTTGATGACACATTGCTGGCGAATATCCTGATTGCGCGCCCGCAGGCGACCCAGCAGGAAGTGGAAGAGG
CCGCCCGCGCGGCGCAGTGTCTTGAATTCATTACCCGCCTTCCTCAAGGCTGGCTGACGCCAATGGGCGAGATGGGCGGA
CAGCTATCGGGCGGCGAGCGCCAGCGGATTTCCATTGCCAGGGCCTTATTGAAAGATGCGCCAATCGTCATTCTTGATGA
GCCGACCGCCGCGCTGGATATCGATAGCGAGCTGGCGGTACAGAAAGCTATCGATAACCTGGTTCACAACCGGACGGTGA
TTATTATCGCCCATCGCCTGTCTACCATCGTCGGGGCCGGAAACATCCTGGTGATGGAGGAGGGCAAAGTGGTTGAACAG
GGCACCCATGCGCAGCTGCTCTCTCTTCATGGGCGTTACCAGGCGCTGTGGCACGCGCAAATGGCCGCCCGCGTCTGGCG
CGCCGAAGGGGGTTCCACGTCAGAGGAGGTGGCGCATGAGTGA

Protein sequence :
MKDTNPADNLAWRAIWRQLISSVGSQAGTLRRSLVALLLAALMQGIAFACLYPIVDALLRNEASRLLHWALAFSIAALVT
LALRWYGLGFEYRGHLAQATHELRLRLGEQLRRVPLERLQRGRAGETNALLLGSVDENLNYVIAIANILLLTIVTPLTAS
LATLWIDWRLGLVMLLIFPLLAPFYYWRRPAMRRQMQTLGEAHQRLSGDIVEFAQGMMVLRACGSDADKSRALRDHFNAL
ENLQTRTHRQSAGATMLIAGVVELGLQVVVLCGIIWVVTGTLNLAFLIAAAAMIMRFAEPMAMFISYTSVVELIASALQR
IEQFMAIAPLPVAERGEMPECYDIRFDNIHYRYDDSGDPALNDLSLTFPAASMSALVGASGAGKTTVSKLLMRYADPQQG
RISIGGVDIRRLTAEQLNSLISVVFQDVWLFDDTLLANILIARPQATQQEVEEAARAAQCLEFITRLPQGWLTPMGEMGG
QLSGGERQRISIARALLKDAPIVILDEPTAALDIDSELAVQKAIDNLVHNRTVIIIAHRLSTIVGAGNILVMEEGKVVEQ
GTHAQLLSLHGRYQALWHAQMAARVWRAEGGSTSEEVAHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
irp7 YP_002346905.1 ABC transporter permease Not tested HPI Protein 0.0 90
ybtQ NP_669703.1 permease and ATP-binding protein of yersiniabactin-iron ABC transporter Virulence HPI Protein 0.0 90
ybtQ NP_993010.1 ABC transporter permease Virulence HPI Protein 0.0 90
ybtQ YP_070127.1 ABC transporter permease Virulence HPI Protein 0.0 90
ybtQ CAA21387.1 - Virulence HPI Protein 0.0 90
irp7 CAB46572.1 inner membrane ABC-transporter, Irp7 Virulence HPI Protein 0.0 90
irp7 YP_001006812.1 inner membrane ABC-transporter YbtQ Not tested HPI Protein 0.0 90
APECO1_1055 YP_853072.1 ABC transporter Not tested PAI IV APEC-O1 Protein 0.0 90

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KOX_20615 YP_005020084.1 yersiniabactin-iron ABC transporter permease ATP-binding protein YbtQ BAC0433 Protein 0.0 90