Gene Information

Name : KOX_19305 (KOX_19305)
Accession : YP_005019822.1
Strain : Klebsiella oxytoca KCTC 1686
Genome accession: NC_016612
Putative virulence/resistance : Resistance
Product : AraC family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4172617 - 4172991 bp
Length : 375 bp
Strand : -
Note : COG2207 AraC-type DNA-binding domain-containing proteins

DNA sequence : 
ATGAACACTGGCGCATTCATTCACGATTTACTCGACTGGATCGACAACAATCTTGATAGCCGTCTGGACATTGGCACCGT
CGCCAGGCGAGCCGGCTATTCGAAATGGCATCTGCAGCGGCTATTTAAGGAGCATACCGGTTATCCTCTCGCCGAGTATA
TTCGCGCGCAAAAGCTACAAAAATCGGTCGAGCGCTTAGCCCACAGCGACGAACCGATTTTGAACGTGGCGATCGCCCTG
GGCTTTGACTCCCAGCAGTCCTTCAACCGCAGCTTCAAGCGTCAGTTCGGCCAGGCCCCCGGCGCATGGCGCCGCAGCAT
CGGCAACCCGGATACGACTGGATTAAGCCAGCCGACCCCGCCCTTCTCTGACTAA

Protein sequence : 
MNTGAFIHDLLDWIDNNLDSRLDIGTVARRAGYSKWHLQRLFKEHTGYPLAEYIRAQKLQKSVERLAHSDEPILNVAIAL
GFDSQQSFNRSFKRQFGQAPGAWRRSIGNPDTTGLSQPTPPFSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 8e-19 49
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 8e-19 49
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 1e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KOX_19305 YP_005019822.1 AraC family transcriptional regulator CP001918.1.gene2033. Protein 3e-23 50
KOX_19305 YP_005019822.1 AraC family transcriptional regulator CP000647.1.gene1624. Protein 3e-23 49
KOX_19305 YP_005019822.1 AraC family transcriptional regulator CP001138.1.gene1637. Protein 4e-23 49
KOX_19305 YP_005019822.1 AraC family transcriptional regulator NC_010558.1.6276025. Protein 3e-19 49
KOX_19305 YP_005019822.1 AraC family transcriptional regulator NC_002695.1.917339.p Protein 3e-23 46
KOX_19305 YP_005019822.1 AraC family transcriptional regulator BAC0560 Protein 3e-23 46
KOX_19305 YP_005019822.1 AraC family transcriptional regulator CP000034.1.gene1596. Protein 3e-23 46
KOX_19305 YP_005019822.1 AraC family transcriptional regulator CP001138.1.gene612.p Protein 2e-21 44
KOX_19305 YP_005019822.1 AraC family transcriptional regulator BAC0371 Protein 2e-22 42
KOX_19305 YP_005019822.1 AraC family transcriptional regulator NC_002695.1.914293.p Protein 2e-22 42
KOX_19305 YP_005019822.1 AraC family transcriptional regulator CP000034.1.gene4505. Protein 5e-22 41
KOX_19305 YP_005019822.1 AraC family transcriptional regulator CP000647.1.gene4499. Protein 4e-23 41
KOX_19305 YP_005019822.1 AraC family transcriptional regulator CP001138.1.gene4488. Protein 3e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KOX_19305 YP_005019822.1 AraC family transcriptional regulator VFG1038 Protein 3e-19 49
KOX_19305 YP_005019822.1 AraC family transcriptional regulator VFG0585 Protein 3e-22 41