Gene Information

Name : KOX_18805 (KOX_18805)
Accession : YP_005019722.1
Strain : Klebsiella oxytoca KCTC 1686
Genome accession: NC_016612
Putative virulence/resistance : Virulence
Product : type VI secretion ATPase, ClpV1 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4063446 - 4066088 bp
Length : 2643 bp
Strand : +
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGGAAAATCCCGCCATTTTGTTACGCCGACTTAACCCTTACTGCGCCCGTGCGATGGAAGGCGCTGCCACCCTGTGCCA
GACCCGGGCGCACGCGGAAATCCTGCCTGAGCACTGGCTGCTGAAACTGCTGGAGCAGGGCGAGGGCGACCTGACGGTGC
TGGCGCGGCGCTACGAATGGGATATGGACGCGATATGGCAGGATTTGCTGACCTTTATGGATAAGCTCCCCCGTTCGGTG
CGCGGCCGCCCGCAGCTTTCAGACGCTATTCAGACTCTGATGCAGGAGGCATGGCTAAGCGCTTCGCTGGCCGGGGAGGA
GCATATCCGTAGTATCCACCTGCTGATGGCGCTGGTGGATAAACAGAGTCTGGTGCGCTGCGACGGCCTGTGGCCGCTGC
TGACCCTGGCGCAGAGCCAGCTGGCGCGCCTGCGTCCGCTACTGGACGCGCAGTCCGAGGAACGCCCGGAGGTGCAGCAG
GAAGCAGAGCTGGCGCAGGGCGACGAGGTGGCGTTTGTCGGCCGTCCGGTTAATGCGGGCGTAAAAGAAGGGGATCTGAA
TCCGGCCCTGCAGAATGCGCTGGATAAGTTCACCCTCGACGTGACCGCCCGCGCCCGGGACGGCAAAATCGACCCGGTGT
TCGGCCGTGATAATGAAATCCGCCAGATGGTGGACATTCTTTCCCGACGCCGCAAGAACAACCCGATACTGGTGGGCGAG
CCGGGCGTCGGCAAGACCGCGCTGGTGGAAGGTCTGGCGATCAGAATCGCCGAAGGCAATGTCCCGGACGCGCTGAAACC
GGTAAGCGTGCGCACCCTTGACCTCGGCCTGCTGCAGGCCGGAGCGGGGGTGAAGGGAGAATTCGAGCAGCGGCTGAAAA
ACATTATCGACGCGGTGCAGCAGTCGCCGCTGCCTGTGCTTCTGTTTATTGATGAGGCCCACACCCTTATCGGCGCGGGT
AACCAGGCGGGCGGCGCCGATGCGGCTAACCTGCTGAAACCGGCCCTTGCCCGGGGCGAACTCAGAACCATCGCCGCCAC
AACCTGGAGCGAGTACAAACAGTATTTTGAGCGCGATGCGGCGCTGGAGCGGCGCTTCCAGATGATCAAAGTCGATGAGC
CGGACGACGACACCGCCTGCCTGATGCTCAGGGGCCTGAAGTCCCGCTACGCGGAGCATCACGGGGTGCACATCACCGAT
GAGGCGGTGCGCGCCGCCGTCACCCTCTCCAGACGCTATCTGACCGGACGCCAGCTGCCGGACAAGGCGGTGGATTTACT
CGACACCGCCTCCGCCCGCATCCGCATGAGCCTGGATACGGTGCCGGCACCGCTGACCCGCCTGAAGGCGCAGCTCACCG
GCCTGGCGATGGAAAAGCAGGCGCTGCTGGAAGATATCGCGGCGGGCAACCATACCCACGGCGAACGCCTGGCGGCCATC
GAACAGGACGAAGTCCGTATTATCCTGCAGCTCGACGAGCTGGAAACGCAGTACGGCCAGGAGCTGAAGCTCACGGAAAA
CCTGCTCGCCTGCCGCGCCGATATCTCCCGCCAGGCGGAAATCGCGGACCTGCAAAACCAGCTTAGTGCCGTGCAGCAGG
GGAACCCGCTGCTGGGGCTGGACGTGGACGCGCGCACCGTTGCCACGGTCATCGCCGACTGGACCGGCGTGCCGCTCTCG
TCTCTGATGAAGGATGAGCAGACGGAGCTGCTGAGCCTGGAACAGCAGCTCGGTAGACGCGTGGTGGGCCAGGACGCGGC
GCTGAACGCCATCGCGCAGCGTCTCCGTGCCAGCAAAACCGGGCTGACGTCGGAGAACGGCCCGCAGGGCGTGTTCCTGC
TGACCGGGCCGAGCGGCACCGGCAAGACTGAAACCGCGCTTGCCCTTGCTGACGCGCTGTTCGGCGGTGAGAAATCCTTA
ATCACTATCAACCTCTCCGAATACCAGGAGCCGCATACCGTCTCCCAGTTGAAAGGCTCTCCTCCGGGGTACGTCGGCTA
CGGCCAGGGCGGGATCCTCACTGAAGCGGTCAGAAAGCGTCCGTACAGCGTGGTGCTGCTGGACGAAGTGGAGAAGGCCC
ATCGGGACGTGATGAACCTGTTCTACCAGGTGTTTGACCGGGGTTTTATGCGCGACGGCGAGGGGCGGGAGATCGACTTT
CGCAACACGGTTATTCTGATGACCTCCAACCTCGGCAGCGACCACATCATGCAGATGCTGGACGAACGGCCGGAGGCCAT
GGAATCCGACCTGCATGAACTGCTGCGTCCGCTGCTGCGCGACCACTTCCAGCCCGCGCTGCTGGCGCGCTTCCAGACGG
TGATCTACCGCCCGCTCACGCGGGACGCGATGCGCACGATTGTCGGAATGAAGCTCAGCCAGGTGAGCAAACGCCTCAGT
CGCCACTACGGCATGACCACTGCCATCAGCGACAGCCTGTACGACGCTCTGACGGATGCCTGCCTGCTGCCGGATACCGG
GGCGCGCAACGTGGACAGCCTGCTCAATCAGCAGATACTGCCGGCGCTGAGCCTGCAGCTGTTAAGCCATCAGGCGGCGG
GGCAGAAGCCGCAGCACCTGATGCTGGGCCGGGATGAAGAGGGGGGGATTGTGATGGAGTTTGGCGCAGGGGCGGGCGTA
TGA

Protein sequence :
MENPAILLRRLNPYCARAMEGAATLCQTRAHAEILPEHWLLKLLEQGEGDLTVLARRYEWDMDAIWQDLLTFMDKLPRSV
RGRPQLSDAIQTLMQEAWLSASLAGEEHIRSIHLLMALVDKQSLVRCDGLWPLLTLAQSQLARLRPLLDAQSEERPEVQQ
EAELAQGDEVAFVGRPVNAGVKEGDLNPALQNALDKFTLDVTARARDGKIDPVFGRDNEIRQMVDILSRRRKNNPILVGE
PGVGKTALVEGLAIRIAEGNVPDALKPVSVRTLDLGLLQAGAGVKGEFEQRLKNIIDAVQQSPLPVLLFIDEAHTLIGAG
NQAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDAALERRFQMIKVDEPDDDTACLMLRGLKSRYAEHHGVHITD
EAVRAAVTLSRRYLTGRQLPDKAVDLLDTASARIRMSLDTVPAPLTRLKAQLTGLAMEKQALLEDIAAGNHTHGERLAAI
EQDEVRIILQLDELETQYGQELKLTENLLACRADISRQAEIADLQNQLSAVQQGNPLLGLDVDARTVATVIADWTGVPLS
SLMKDEQTELLSLEQQLGRRVVGQDAALNAIAQRLRASKTGLTSENGPQGVFLLTGPSGTGKTETALALADALFGGEKSL
ITINLSEYQEPHTVSQLKGSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGFMRDGEGREIDF
RNTVILMTSNLGSDHIMQMLDERPEAMESDLHELLRPLLRDHFQPALLARFQTVIYRPLTRDAMRTIVGMKLSQVSKRLS
RHYGMTTAISDSLYDALTDACLLPDTGARNVDSLLNQQILPALSLQLLSHQAAGQKPQHLMLGRDEEGGIVMEFGAGAGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 3e-143 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KOX_18805 YP_005019722.1 type VI secretion ATPase, ClpV1 family protein VFG2076 Protein 3e-160 45
KOX_18805 YP_005019722.1 type VI secretion ATPase, ClpV1 family protein VFG2084 Protein 2e-134 44