Gene Information

Name : KOX_16440 (KOX_16440)
Accession : YP_005019249.1
Strain : Klebsiella oxytoca KCTC 1686
Genome accession: NC_016612
Putative virulence/resistance : Resistance
Product : AraC family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3568998 - 3569360 bp
Length : 363 bp
Strand : +
Note : COG2207 AraC-type DNA-binding domain-containing proteins

DNA sequence :
ATGTTTATTTCCGAAACAGTGATAGCCGTCATCATTGACTGGATCGACAATAACTTACATAAACCACTGCGTATAGAACA
GATAGCCCGTTATTCAGGGTATTCCAAATGGTACCTGCAGGGTTTGTTCTTGCAATATAGAGGCGAGAGCCTCGGGCGCT
ATATCCGTAATAAAAAACTGGACTCAGCGGCCCGCGATTTACGCGAGACCGATGAGAATATTTACAGTATTGGTTTGCGC
TACGGCTATGACTCGCAGCAAACATTCACCCGATTATTTACGCGTCATTTTCATTTGCCGCCCGGTGAATATCGCAAGAA
AAACAAAACAGCCTGTTACGTACCGGGTAAGGCTGAATCTTAA

Protein sequence :
MFISETVIAVIIDWIDNNLHKPLRIEQIARYSGYSKWYLQGLFLQYRGESLGRYIRNKKLDSAARDLRETDENIYSIGLR
YGYDSQQTFTRLFTRHFHLPPGEYRKKNKTACYVPGKAES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 2e-21 45
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 7e-18 43
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 7e-18 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KOX_16440 YP_005019249.1 AraC family transcriptional regulator CP001138.1.gene612.p Protein 2e-35 66
KOX_16440 YP_005019249.1 AraC family transcriptional regulator CP001918.1.gene2033. Protein 1e-20 47
KOX_16440 YP_005019249.1 AraC family transcriptional regulator CP000647.1.gene4499. Protein 1e-21 46
KOX_16440 YP_005019249.1 AraC family transcriptional regulator CP000647.1.gene1624. Protein 3e-20 46
KOX_16440 YP_005019249.1 AraC family transcriptional regulator CP001138.1.gene1637. Protein 2e-20 46
KOX_16440 YP_005019249.1 AraC family transcriptional regulator BAC0371 Protein 1e-21 45
KOX_16440 YP_005019249.1 AraC family transcriptional regulator NC_002695.1.914293.p Protein 1e-21 45
KOX_16440 YP_005019249.1 AraC family transcriptional regulator CP001138.1.gene4488. Protein 7e-22 45
KOX_16440 YP_005019249.1 AraC family transcriptional regulator CP001918.1.gene327.p Protein 1e-21 45
KOX_16440 YP_005019249.1 AraC family transcriptional regulator NC_002695.1.917339.p Protein 7e-21 45
KOX_16440 YP_005019249.1 AraC family transcriptional regulator BAC0560 Protein 7e-21 45
KOX_16440 YP_005019249.1 AraC family transcriptional regulator CP000034.1.gene1596. Protein 6e-21 45
KOX_16440 YP_005019249.1 AraC family transcriptional regulator CP000034.1.gene4505. Protein 3e-21 44
KOX_16440 YP_005019249.1 AraC family transcriptional regulator NC_010558.1.6276025. Protein 3e-18 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KOX_16440 YP_005019249.1 AraC family transcriptional regulator VFG0585 Protein 6e-22 45
KOX_16440 YP_005019249.1 AraC family transcriptional regulator VFG1038 Protein 3e-18 43