Gene Information

Name : KOX_16435 (KOX_16435)
Accession : YP_005019248.1
Strain : Klebsiella oxytoca KCTC 1686
Genome accession: NC_016612
Putative virulence/resistance : Virulence
Product : tetracycline repressor protein class A from transposon 1721
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3568317 - 3568907 bp
Length : 591 bp
Strand : +
Note : COG1309 Transcriptional regulator

DNA sequence :
ATGGCGAAAATCCAGCGAGATCAGGTGATTGAGGCAGCATTAGCATTATTAGATGAGGTCGGCCTGGAAGCGATCACGAC
CCGTAAGCTGGCGCAAAAACTGGGGGTGGAATCAGCGACGTTGTACTGGCATTTCAAGAACAAGGCCAGTTTACTTGAAG
AAATGGCTTCCGCGGTTTTAGCCAAACACCATTCCCTGCCTGTCCCCGAAGATATTGCTGAATGGGCAAACTGGCTGGCG
GATAACGCCCGTAGTTTCCGGCGCGCTCTGCTCGCCCATCGGGACGGCGCCCTGTTACATGCCGGGACATCACCGGCCCG
GGTGGGAGGGGATACGTTTCGTCCCAAGGTGGCGTATCTTGCGCGCGTCGGTTTCACTGAGGCCGACGCCGCAATGATAT
TACTCACTCTGAGTGAATACACCCTGGGATGCGTATTAGAGGAGCAGTCCCGCTCGGGCGGTGATGATAATCAAATTTTA
TCAAAGCCATCGCCAGGAATTGCCTCTATCGAATCGCTGGTTTATCCCCATCCGGATACTGCGTTCGAATTCGGTCTGTC
GTTGATAATGAAAGGGTTATTAGTGCCCTGA

Protein sequence :
MAKIQRDQVIEAALALLDEVGLEAITTRKLAQKLGVESATLYWHFKNKASLLEEMASAVLAKHHSLPVPEDIAEWANWLA
DNARSFRRALLAHRDGALLHAGTSPARVGGDTFRPKVAYLARVGFTEADAAMILLTLSEYTLGCVLEEQSRSGGDDNQIL
SKPSPGIASIESLVYPHPDTAFEFGLSLIMKGLLVP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetR YP_006098395.1 tetracycline repressor Not tested Tn2411 Protein 2e-36 45
tetR(A) ACK44536.1 TetR(A) Not tested SGI1 Protein 1e-36 45
tetR(A) AGK07026.1 TetR(A) Not tested SGI1 Protein 1e-36 45
tetR(A) AGK07084.1 TetR(A) Not tested SGI1 Protein 1e-36 45
tetR CAJ77065.1 Tetracycline repressor protein Not tested AbaR1 Protein 1e-36 45
tetR(A) ACN81010.1 repressor protein Not tested AbaR5 Protein 2e-36 45
BJAB07104_00278 YP_008207743.1 Transcriptional regulator Not tested AbaR25 Protein 2e-36 43
BJAB0868_00282 YP_008211608.1 Transcriptional regulator Not tested AbaR26 Protein 2e-36 43
tetR AEA34668.1 tetracycline repressor protein Not tested Not named Protein 1e-36 43
tetR YP_005797161.1 tetracycline repressor protein class G Not tested AbaR4e Protein 2e-36 43
tetR AFH57203.1 repression protein Not tested AbaR4a Protein 1e-36 43
tetR(B) AEQ20906.1 tetracycline repressor protein Not tested Tn6166 Protein 2e-36 43
tetR AFV47970.1 repressor protein TetR Not tested AbaR25 Protein 1e-36 43
tetR(B) AEZ06046.1 repressor protein Not tested Tn6167 Protein 2e-36 43
tetR AFV47998.1 repressor protein TetR Not tested delta-AbaR25 Protein 1e-36 43
ABZJ_00261 YP_005524217.1 tetracycline repressor protein TetR Not tested AbaR22 Protein 2e-36 43
tetR AAL08444.1 tet repressor Not tested SRL Protein 4e-36 42
tetR1 YP_005176239.1 tetracycline repressor protein Not tested ICEPmu1 Protein 2e-34 41
tetR2 YP_005176247.1 tetracycline repressor protein Not tested ICEPmu1 Protein 2e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KOX_16435 YP_005019248.1 tetracycline repressor protein class A from transposon 1721 VFG1035 Protein 2e-36 42