Gene Information

Name : KOX_00140 (KOX_00140)
Accession : YP_005016014.1
Strain : Klebsiella oxytoca KCTC 1686
Genome accession: NC_016612
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 32730 - 33971 bp
Length : 1242 bp
Strand : +
Note : COG0582 Integrase

DNA sequence : 
ATGGCAAGACAAACCAAACCTCTATCCGTTAAGGAAATCGAATCTGCTAAACCCAAAGAAGCGGACTACGTTCTCTATGA
TGGCGATGGCCTTGAGCTACTCATCAAATCCAGCGGGAGTAAAATCTGGCAGTTTCGCTACATTCGTCCTGTCACCAAGA
AACGAGCAAAGAAGAGCATAGGTCCCTACCCGTCAGTTACCCTTGCCGATGCCAGAAACTATCGAGCAGAGTCACGCTCT
CTCCTGGCGAAACAAATCGACCCACAGGAACATCAGCAAGAACAACTTCGCAGTTCGCTGGAAGCCAAAACTAATACTTT
CCAGCTCGTGGCTGAACGTTGGTGGAATGTGAAGAAAGCCAGTGTGACCGAAGACTACGCAGAGGATATTTGGCGCTCTC
TTGAGAGAGATGTTTTTCCTGCGATTGGCGACGTTAGCGTTACAGATATTAAAGCTCACACACTGGTTCAGACCGTCCAA
CCGGTTCAGGCCAGAGGAGCACTGGAAACCGTTCGTCGCCTGTGCCAGCGCATTAATGAGGTCATGATCTATGCCCAAAA
CACAGGGCTTATTGATGCTGTTCCCAGCGTTAATATCGGTAAAGCCTTTGAGAAGCCGCAGAAGAAGAACATGCCAAGCA
TTCGACCGGATCAGCTACCTCAATTGATGCAGACGATGCGTACGGCCAGCATTAGCCTTTCAACACGATGCCTGTTCATG
TGGCAACTTCTTACCATCACCCGCCCTGCCGAAGCGGCTGAAGCTCGTTGGGAAGAGGTAGACATGGAAGCGCGAGAGTG
GAAGATTCCTGCAGCACGCATGAAAATGAACCGCGACCATACTGTTCCATTGTCAGATGAAGCAATTGCGATACTGGAGA
TGATGAAGCCGTTAAGTGGTAATCGAGAATTTATCTTTTCCAGTCGCATTAAGCCTACCCAGCCGATGAACAGCCAGACA
GTGAATGCTGCACTCAAGCGTGCTGGCTTAGGAGGCATACTCGTATCACACGGTTTACGTTCTATCGCTAGTACGGCACT
CAATGAGGAAGGATTACTGCCTGATGTCATTGAAGCAGCACTGGCTCATGTAGACAAAAATGAGGTACGTCGCGCTTATA
ACCGCAGTGATTACCTTGAGCAACGGCGATCGATGATGCAATGGTGGGCTGATTTTGTTATGGCTGCTGATCGCGGAAGT
ATGATTGAGGGAGGTATGAGGGGAGAGCGTTTAGCGGGATGA

Protein sequence : 
MARQTKPLSVKEIESAKPKEADYVLYDGDGLELLIKSSGSKIWQFRYIRPVTKKRAKKSIGPYPSVTLADARNYRAESRS
LLAKQIDPQEHQQEQLRSSLEAKTNTFQLVAERWWNVKKASVTEDYAEDIWRSLERDVFPAIGDVSVTDIKAHTLVQTVQ
PVQARGALETVRRLCQRINEVMIYAQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMQTMRTASISLSTRCLFM
WQLLTITRPAEAAEARWEEVDMEAREWKIPAARMKMNRDHTVPLSDEAIAILEMMKPLSGNREFIFSSRIKPTQPMNSQT
VNAALKRAGLGGILVSHGLRSIASTALNEEGLLPDVIEAALAHVDKNEVRRAYNRSDYLEQRRSMMQWWADFVMAADRGS
MIEGGMRGERLAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 1e-98 52
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 1e-98 52
int AAK20773.1 integrase Not tested VPI Protein 1e-98 52
int AAK20803.1 integrase Not tested VPI Protein 1e-98 52
unnamed AAA82714.1 integrase Not tested VPI Protein 1e-98 52
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 2e-98 49
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 2e-79 46
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 2e-79 46
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 2e-79 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KOX_00140 YP_005016014.1 integrase VFG1092 Protein 7e-80 46