|
Name : KOX_13565 (KOX_13565) Accession : YP_005018676.1 Strain : Klebsiella oxytoca KCTC 1686 Genome accession: NC_016612 Putative virulence/resistance : Virulence Product : general secretion pathway protein D Function : - COG functional category : - COG ID : - EC number : - Position : 2934715 - 2936694 bp Length : 1980 bp Strand : + Note : COG1450 Type II secretory pathway, component PulD DNA sequence : TTGTTGAATATAAAAATAATCAAAAGACTCTGTATCGTTGTCTTGGTGTTTTTTTCGCTGGTCATTCGGCAGGGCGCGGG CGCTGAGTTTTCTGCCAGCTTTAAGGGGGTGGATATTCAGGAGTTTATTAATACCGTCAGCAAGAACCTGAATAAAACGA TTATTATCGATCCGGCTGTACACGGCACGATTACGGTGCGCAGTTACGATAGGCTCAACGATGAACAATATTACCAGTTT TTCCTGAGCGTGCTGGATGTATACGGCTTTGCCGTGGTGGACATGAAGAACGGCGTGCTGAAGGTGGTCCGCGCCAAAGA TGCAAAAACCGCGGCGGTACCTCTCGCCAGCGATGCTCAACCGGGAAAGGGAGATGAAGTCGTGGCGCGCGTTGTGCCCG TCAATAATGTGCCTGCCCGTGATTTGGTCCCGTTACTTCGTCAATTGAATGATAACGCCGGGGTGGGCAGCGTTGTGCAT TATGAGCCTTCCAACGTCCTGTTGATGACGGGACGGGCGGGAGTGATTAAGCATTTGATGGAAATAGTTGAGCGCGTTGA TAAAGCGGGCGATCGCAGCGTCGTCACGTTACCGCTGGCCTACGCGTCCGCTGCCGACGTTGTCAAAATGGTGACCGAAT TAACCCGGGATGCCGGTAAATCAGCGTCATCGGGCTTAATGATAGCGAATGTTGTTGCGGATGAACGTACGAATTCGGTA TTGATTAGCGGCGAACCGAATTCTCGTCAATTAATTATCGCGATAGTTAAGCAGCTGGATCGCGAACAATTTGTTCAGGG CAACACCAGGGTTATTTATCTGAAGTATGCCAAAGCGACCGATTTGGTCGAGGTCTTAACGGGGATCGGCGACACTATTC AGGGCGAGCAAAAGAGTGCTAAACCGGCCATCGCATTACGCAAAGACATTACTATCAAAGCGCATGAGCAAACCAACTCG CTGATCCTGACGGCGGCCCCGGACGTTATGCGGGATTTGGAGGGGGTGATAGCTCAGTTGGATATTCGTCGCGCCCAGGT CCTGGTCGAAGCGATTATTGCCGAAGTACAGGATGCTGATGGTCTCAATCTGGGCATTCAGTGGGCCAATAAAAATAGCG GCATGTCGCAATTTACCAATACGGGCCTACCTATTACGACCGCAATTGCCGGAGCCAATCAATATAAAAAAGAGGGCGCG GTGGATAGCTCGATTGCCAGTACGCTCAACGGTCTTAATGGTATTGCGGCGGGGTTTTATCAAGGGAATTGGGCGATGTT ATTGAGCGCGCTTTCCAGTAATAGCAAGAATGATATTTTGGCGACGCCGAGCATCGTGACGCTGGATAATATGGAGGCCA TGTTCAATGTTGGCCAGGAGGTACCGGTGCTCTCCGGCTCGCAAACAACCTCTGGCGATAACGTCTTCAATACCGTGGAG CGCAAAACGGTCGGAATTAAGTTGAAGGTAAAGCCACAGATTAACGAAGGGGATTCTGTTTTACTGGAAATCGAACAGGA GGTTTCCAGCGTGGCTGACGCCGCCTCCAGCAGTAGCGCTGACCTGGGGGCGACCTTCAATACTCGCACGGTTAATAATG CGGTGCTGGTGGGAAGTGGCGAAACGGTCGTCGTCGGAGGGCTGCTGGATAAAAGCGTGACGGATAGCGTGGATAAAGTC CCGGTGCTGGGAGATATTCCGGTTCTGGGTTACCTGTTTCGCTCTAACAGTAAAAAAGTCTCCAGACGTAATCTGATGCT CTTTATTCGCCCATCAATTATCCGCGATCGCGATCAGTATCGTCATGCATCCGCTGATAAATATCATGCTTTTAATCAGG AACAAGTTCAGCAGCGTGGTCATCAGGATAACCCAGCGACGTTAAACAATGACGTATTAAAGCTGCCTCCGGATCAAAAT GGCGCCACCTTCCTGAAGGTTCGCGCGGCGATTAGCGCATTTTATTCGCAGGAGGGGTAA Protein sequence : MLNIKIIKRLCIVVLVFFSLVIRQGAGAEFSASFKGVDIQEFINTVSKNLNKTIIIDPAVHGTITVRSYDRLNDEQYYQF FLSVLDVYGFAVVDMKNGVLKVVRAKDAKTAAVPLASDAQPGKGDEVVARVVPVNNVPARDLVPLLRQLNDNAGVGSVVH YEPSNVLLMTGRAGVIKHLMEIVERVDKAGDRSVVTLPLAYASAADVVKMVTELTRDAGKSASSGLMIANVVADERTNSV LISGEPNSRQLIIAIVKQLDREQFVQGNTRVIYLKYAKATDLVEVLTGIGDTIQGEQKSAKPAIALRKDITIKAHEQTNS LILTAAPDVMRDLEGVIAQLDIRRAQVLVEAIIAEVQDADGLNLGIQWANKNSGMSQFTNTGLPITTAIAGANQYKKEGA VDSSIASTLNGLNGIAAGFYQGNWAMLLSALSSNSKNDILATPSIVTLDNMEAMFNVGQEVPVLSGSQTTSGDNVFNTVE RKTVGIKLKVKPQINEGDSVLLEIEQEVSSVADAASSSSADLGATFNTRTVNNAVLVGSGETVVVGGLLDKSVTDSVDKV PVLGDIPVLGYLFRSNSKKVSRRNLMLFIRPSIIRDRDQYRHASADKYHAFNQEQVQQRGHQDNPATLNNDVLKLPPDQN GATFLKVRAAISAFYSQEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 1e-124 | 44 |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-116 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| KOX_13565 | YP_005018676.1 | general secretion pathway protein D | VFG2047 | Protein | 7e-115 | 42 |
