Gene Information

Name : KOX_13280 (KOX_13280)
Accession : YP_005018619.1
Strain : Klebsiella oxytoca KCTC 1686
Genome accession: NC_016612
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2868234 - 2869751 bp
Length : 1518 bp
Strand : +
Note : COG1190 Lysyl-tRNA synthetase (class II)

DNA sequence :
ATGTCTGAACAACAAGCACAAGGTGCCGATGAGGCAATTGACCTTAATAATGAACTGAAAACCCGTCGTGAAAAACTGGC
CGCGCTGCGCGAGCAGGGCGTGGCGTTCCCGAACGATTTTCGCCGTGACCACACTTCTGACCAGCTCCATGCGGAATTTG
ATGGTAAGGAAAACGACGAGCTCACCTCTCTGAACGTCGAGGTCGCCGTGGCTGGCCGCATGATGACCCGCCGGATTATG
GGGAAAGCCTCTTTCGTCACCTTACAGGACGTCGGCGGCCGCATTCAGCTGTACGTCGCCCGCGACGATCTGGCGGAAGG
CGTCTACAACGAACAGTTTAAGAAATGGGATCTTGGCGACATCATCGCCGCCCGCGGTAAGCTGTTTAAAACCCAGACCG
GCGAACTCTCCATTCACTGCACCGAGCTGCGCCTGCTGACCAAGGCATTGCGCCCGCTGCCGGACAAGTTTCACGGCCTG
CAGGATCAGGAGGCGCGCTATCGTCAGCGCTATCTGGATCTGATCTCCAACGAAGAGTCGCGCCACACCTTCAAGGTGCG
TTCGCAGATCCTCGCCACCATGCGTCAGTTCATGGTCGCGCGCGGCTTTATGGAAGTCGAGACTCCGATGATGCAGGTGA
TCCCCGGCGGCGCCTCCGCGCGTCCGTTTATCACCCATCACAACGCGCTCGATCTGGATATGTATCTGCGCATCGCGCCG
GAGCTGTATCTGAAACGGCTGGTGGTCGGCGGCTTCGAACGGGTGTTCGAAATCAACCGCAACTTCCGTAACGAAGGCAT
CTCCGTGCGCCACAACCCTGAGTTCACCATGATGGAACTCTATATGGCGTATGCGGATTACAAAGATCTGATCGAACTGA
CCGAATCTCTGTTCCGCACGCTGGCGCAGACCGTGCTGGGGAAAACCGAAGTCCCGTACGGCGACCAGGTGTTCGACTTC
GGCAAGCCGTTTGAAAAACTGACCATGCGCGAAGCGATCAAGAAATACCGTCCGGAAACCGAGATGGCGGATCTGGATAA
CTTCGAGGCGGCAAAAGCGCTGGCGGAATCCATCGGTATTCACGTTGAGAAGAGCTGGGGGCTGGGGCGTATCGTCACCG
AGATTTTCGACGAAGTAGCGGAAGCCCATCTGATCCAGCCAACCTTTATCACCGAGTATCCGGCGGAGGTTTCGCCGCTG
GCGCGCCGTAACGACGTGAACCCGGAAATCACCGATCGTTTCGAGTTCTTTATCGGCGGGCGTGAAATCGGCAACGGCTT
TAGCGAGCTGAACGACGCGGAAGACCAGGCCCAGCGTTTCCAGGATCAGGTCAACGCCAAAGCGGCGGGGGATGATGAAG
CGATGTTCTACGACGAAGACTACGTCACCGCGCTGGAATATGGCCTGCCGCCGACGGCCGGTCTGGGCATCGGTATCGAC
CGCATGGTGATGCTGTTTACCAACAGCCATACCATTCGCGACGTGATTCTGTTCCCGGCAATGCGTCCGCAGAAGTAA

Protein sequence :
MSEQQAQGADEAIDLNNELKTRREKLAALREQGVAFPNDFRRDHTSDQLHAEFDGKENDELTSLNVEVAVAGRMMTRRIM
GKASFVTLQDVGGRIQLYVARDDLAEGVYNEQFKKWDLGDIIAARGKLFKTQTGELSIHCTELRLLTKALRPLPDKFHGL
QDQEARYRQRYLDLISNEESRHTFKVRSQILATMRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAP
ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQTVLGKTEVPYGDQVFDF
GKPFEKLTMREAIKKYRPETEMADLDNFEAAKALAESIGIHVEKSWGLGRIVTEIFDEVAEAHLIQPTFITEYPAEVSPL
ARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFQDQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGID
RMVMLFTNSHTIRDVILFPAMRPQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 1e-170 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KOX_13280 YP_005018619.1 lysyl-tRNA synthetase VFG1668 Protein 6e-171 68