Gene Information

Name : KOX_11310 (KOX_11310)
Accession : YP_005018227.1
Strain : Klebsiella oxytoca KCTC 1686
Genome accession: NC_016612
Putative virulence/resistance : Virulence
Product : pullulanase secretion envelope protein PulD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2428597 - 2430579 bp
Length : 1983 bp
Strand : -
Note : COG1450 Type II secretory pathway, component PulD

DNA sequence :
TTGATCATCGCCAACGTCATTCGCCCATTTTCCCTGATGCTGCTGGTATTCGCCGCGCTGTTATTCAAACCGGCCGCGGC
GGAAGAGTTTTCCGCCAGCTTTAAGGGCACCGATATTCAGGAATTTATCAATACGGTGAGTAAAAACCTGAATAAAACGG
TCATTATCGATCCCAGCGTACGCGGCACCATTACCGTGCGCAGCTACGATATGCTCAACGAAGAGCAATATTATCAATTC
TTCCTCAGCGTCCTCGATGTCTATGGCTTCGCGGTGATTAATATGAATAACGGCGTCCTGAAAGTCGTTCGTTCGAAGGA
TGCGAAAACCGCCGCGGTGCCGGTGGCGAGCGATGCCGCGCCGGGCATTGGCGATGAGGTCGTCACCCGCGTAGTGCCCC
TGACCAACGTCGCGGCCCGCGATCTGGCGCCGCTGCTGCGCCAGCTTAACGATAACGCCGGCGCGGGCAGCGTGGTGCAC
TATGAACCCTCCAACGTCCTGCTGATGACCGGCCGCGCGGCGGTCATCAAGCGCCTGCTAACCATCGTCGAACGCGTCGA
TAACGCCGGAGACCGCAGCGTGGTGACTGTTCCCCTCGCCTGGGCCTCCGCCGCCGATGTGGTCAAGCTGGTGACCGAAC
TCAACAAAGACACCAGCAAATCGGCGCTGCCCGGCTCAATGGTCGCCAACGTGGTGGCCGATGAACGCACCAACGCGGTG
CTGGTCAGCGGCGAGCCGAACTCCCGCCAGCGGATCATCGCCATGATTAAGCAGCTCGACCGCCAGCAGGCGACCCAGGG
CAATACCAAAGTGATCTACCTGAAATACGCCAAAGCCTCCGACCTGGTGGAAGTGCTGACCGGCATCAGCAGCACGATGC
AGAGCGAAAAGCAGGCCGCGAAGCCGGTGGCGGCGCTGGATAAAAATATCATTATCAAAGCGCACGGTCAGACCAACGCC
CTGATTGTCACCGCCGCCCCGGACGTAATGAACGATCTGGAACGGGTGATCGCCCAGCTGGATATCCGCCGCCCGCAGGT
GCTGGTCGAAGCGATTATCGCCGAAGTGCAGGACGCTGACGGTCTGAACCTCGGCATCCAGTGGGCCAATAAAAATGCCG
GGATGACCCAGTTCACCAACAGCGGTCTGCCGATATCCACGGCCATCGCCGGGGCCAACCAGTACAACAAAGACGGCACC
GTCAGCAGCTCGCTGGCAAGCGCCTTAAGCTCCTTCAACGGCATTGCCGCCGGGTTCTACCAGGGCAACTGGGCGATGCT
GTTAACCGCCCTCTCCAGCAGCACCAAGAACGATATTCTCGCGACGCCGAGTATCGTCACCCTCGACAACATGGAAGCCA
CCTTTAACGTCGGCCAGGAGGTCCCGGTGCTGACCGGCTCGCAAACCACCTCCGGCGATAACATCTTCAATACCGTCGAG
CGCAAAACCGTCGGCATCAAGCTAAAAGTGAAGCCGCAGATCAATGAAGGCGATTCGGTTCTGCTGGAGATCGAACAGGA
GGTCTCCAGCGTGGCGGACGCCGCCTCCAGCACCAGCTCGGATCTCGGCGCGACCTTCAATACCCGTACGGTTAATAACG
CCGTGCTGGTCGGCAGCGGCGAAACGGTGGTCGTCGGCGGACTGCTGGATAAAAGCGTCTCCGACACCGCCGACAAAGTC
CCTCTGCTCGGCGATATCCCGGTGATTGGCGCGCTGTTCCGCTCCACCAGCAAAAAGGTCTCCAAGCGCAACCTGATGCT
GTTTATCCGCCCGACGGTGATCCGCGACCGCGACGAGTACCGTCAGGCTTCATCCGGGCAGTACACCGCGTTTAACGACG
CCCAGAGCAAACAGCGCGGCAAAGAGAACAACGACGCGATGCTGAGTAACGATCTGCTGGAGATCTACCCGCGCCAGGAT
ACCGCCGCGTTCCGCCAGGTCAGCGCCGCCATCGACGCCTTCAATCTGGGAGGCAATCTATGA

Protein sequence :
MIIANVIRPFSLMLLVFAALLFKPAAAEEFSASFKGTDIQEFINTVSKNLNKTVIIDPSVRGTITVRSYDMLNEEQYYQF
FLSVLDVYGFAVINMNNGVLKVVRSKDAKTAAVPVASDAAPGIGDEVVTRVVPLTNVAARDLAPLLRQLNDNAGAGSVVH
YEPSNVLLMTGRAAVIKRLLTIVERVDNAGDRSVVTVPLAWASAADVVKLVTELNKDTSKSALPGSMVANVVADERTNAV
LVSGEPNSRQRIIAMIKQLDRQQATQGNTKVIYLKYAKASDLVEVLTGISSTMQSEKQAAKPVAALDKNIIIKAHGQTNA
LIVTAAPDVMNDLERVIAQLDIRRPQVLVEAIIAEVQDADGLNLGIQWANKNAGMTQFTNSGLPISTAIAGANQYNKDGT
VSSSLASALSSFNGIAAGFYQGNWAMLLTALSSSTKNDILATPSIVTLDNMEATFNVGQEVPVLTGSQTTSGDNIFNTVE
RKTVGIKLKVKPQINEGDSVLLEIEQEVSSVADAASSTSSDLGATFNTRTVNNAVLVGSGETVVVGGLLDKSVSDTADKV
PLLGDIPVIGALFRSTSKKVSKRNLMLFIRPTVIRDRDEYRQASSGQYTAFNDAQSKQRGKENNDAMLSNDLLEIYPRQD
TAAFRQVSAAIDAFNLGGNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspD YP_854407.1 type II secretion protein GspD Not tested PAI I APEC-O1 Protein 6e-132 47
gspD CAE85234.1 GspD, hypothetical type II secretion protein Not tested PAI V 536 Protein 7e-124 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KOX_11310 YP_005018227.1 pullulanase secretion envelope protein PulD VFG2047 Protein 2e-121 46