Gene Information

Name : KOX_11305 (KOX_11305)
Accession : YP_005018226.1
Strain : Klebsiella oxytoca KCTC 1686
Genome accession: NC_016612
Putative virulence/resistance : Virulence
Product : pullulanase secretion protein PulE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2427107 - 2428600 bp
Length : 1494 bp
Strand : -
Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

DNA sequence :
ATGACCCCCGCCGCTGGACGACGCCCGCTGCTCCCCTTCGGCTACGCCCGCGCGCACAACGTGATGCTCCTGAGCAACGG
CGAAAGCTGCGAGGTTTTCTGCCTCGCCGCCACCGCGCCGCAGGCGCTGCTGGAAGCCCGCAGGGTGGCCGGGATGCCGT
TCAGCCTCGAGCGACTGGAAGCGGAGGCGTTCGAAAAGCTGCTGGTGCTGAGCTATCAGCGCGACTCCGCCGAGGCCCGG
CGCATGATGGCGGATATCGGCAACGAGCTGGATCTGTACACCCTTGCCGAAGAACTGCCGGACACCGACGACCTGCTGGA
TAGCGAAGACGACGCGCCGATTATCCGCCTGATTAACGCCATGCTCACCGAGGCTATCAAAGAGAAAGCGTCGGATATTC
ATATCGAAACCTATGAACGCCACCTGCAAATTCGCTTTCGCGTCGACGGCGTACTGCGCGAAATCCTGCGCCCCCAGCGC
CGCCTCGCCGCGCTGCTGATCTCGCGCATTAAGGTGATGGCGAGCCTTGATATCGCCGAAAAGCGCATTCCTCAGGACGG
TCGCATGGCGCTGCGCATTGGCGGACGCGCCGTCGACGTGCGCGTCTCCACCCTGCCGTCGAGCTACGGCGAACGCGTGG
TGCTGCGTCTGCTCGATAAAAACAGCGTCAATCTCGACCTGCTGACCCTCGGCATGTCGCCCGCGCTGCTTCAGCAGGTG
GATGGACTGATCGCCCGCCCGCACGGCATCGTGCTGGTGACCGGGCCGACCGGTTCGGGAAAAAGCACCACCCTCTACGC
CGCGCTGAGCCGCCTCGATGCCCGCGAGCGCAACATCATGACCATTGAAGATCCTATCGAATATGAGCTGGAGGGCATCG
GTCAGACCCAGGTTAACGCGAAAGTCGATATGACCTTTGCCCGCGGGCTGCGCGCTATTTTGCGCCAGGACCCTGACGTG
GTGCTGGTAGGCGAAATTCGCGACGGCGAAACGGCGCAAATCGCCGTTCAGGCTTCGCTAACCGGTCATCTGGTGCTCTC
AACGCTGCACACCAACAGCGCGCTGGGCGCCATCTCGCGCCTGCAGGATATGGGCGTGGAGCCTTTTCTGCTCTCCACCT
CGCTGCTGGCGGTGATGTCGCAGCGGCTGGTGCGCCGGCTCTGCCCGCACTGTCGCCAGCAGGAACCGGCCAATGCCGAC
ACCGCCCGCCAGATGGAGATCGCTCCCGGCACGGCGCTCTGGCAGCCCCGAGGCTGCGCCGAGTGCGGCTTTACCGGCTA
TCGCGGACGTACCGGCATTCACGAACTGCTGCTGGTGGACGATCGCGTGCGTATGGCAATCCACCGCGGCGAAAACGAGG
TGACGCTGATCCAGCAGCTGGGGGCGGACTATATCACCCTGCGCCACGCCGGACGGGACAAGGCGCTGGCGGGGATCACC
AGCTGGCAAGAGGTGCTGCGGGTTAGCGAACAGCAGATCGCGGAGGCCTCCTGA

Protein sequence :
MTPAAGRRPLLPFGYARAHNVMLLSNGESCEVFCLAATAPQALLEARRVAGMPFSLERLEAEAFEKLLVLSYQRDSAEAR
RMMADIGNELDLYTLAEELPDTDDLLDSEDDAPIIRLINAMLTEAIKEKASDIHIETYERHLQIRFRVDGVLREILRPQR
RLAALLISRIKVMASLDIAEKRIPQDGRMALRIGGRAVDVRVSTLPSSYGERVVLRLLDKNSVNLDLLTLGMSPALLQQV
DGLIARPHGIVLVTGPTGSGKSTTLYAALSRLDARERNIMTIEDPIEYELEGIGQTQVNAKVDMTFARGLRAILRQDPDV
VLVGEIRDGETAQIAVQASLTGHLVLSTLHTNSALGAISRLQDMGVEPFLLSTSLLAVMSQRLVRRLCPHCRQQEPANAD
TARQMEIAPGTALWQPRGCAECGFTGYRGRTGIHELLLVDDRVRMAIHRGENEVTLIQQLGADYITLRHAGRDKALAGIT
SWQEVLRVSEQQIAEAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 1e-125 61
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 8e-126 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KOX_11305 YP_005018226.1 pullulanase secretion protein PulE VFG2048 Protein 3e-126 61
KOX_11305 YP_005018226.1 pullulanase secretion protein PulE VFG0182 Protein 2e-125 60
KOX_11305 YP_005018226.1 pullulanase secretion protein PulE VFG1876 Protein 6e-116 54
KOX_11305 YP_005018226.1 pullulanase secretion protein PulE VFG2426 Protein 4e-75 47