Gene Information

Name : KOX_11300 (KOX_11300)
Accession : YP_005018225.1
Strain : Klebsiella oxytoca KCTC 1686
Genome accession: NC_016612
Putative virulence/resistance : Virulence
Product : pullulanase F protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2425900 - 2427105 bp
Length : 1206 bp
Strand : -
Note : COG1459 Type II secretory pathway, component PulF

DNA sequence :
ATGGCGCTTTTTCGCTATCAGGCCGTTGATGAAAACGGTAAAACCCGGCGCGGCGTCCAGCAGGCGGACTCCGCCCGCCA
CGCTCGCCAGCTGCTGCGGGAAAAGGGCTGGCTGGCGCTGGACATCACCCCGGCAGCCGGCAGCGGCGGGCAACCGCGCT
TTATCCGCCGCACCAACGCCCGCGATCTCGCCCTCCTGACCCGCCAGCTTGCGACGCTGGTCGCCGCCGCCATCCCGCTG
GAAAAAGCGCTCGACGCGGTCGCCCAGCAGTGTGAAAAAAACCAGCTGAAAACCCTGATTGCCGGCGTGCGCGGCAAAGT
GCTGGAAGGCCATTCGCTGGCGGAAGCGATGCGCGGCTACCCGGGCTGCTTCGACGCGCTCTACTGCGCGATGGTCGCCG
CCGGAGAAGCCTCCGGCCACCTCGACGGCGTGCTGAACCGGCTGGCGGACTATACCGAACAGCGCCAGCAGCTGCGCGCC
CGGCTGCTGCAGGCGATGATTTACCCCATCGTGCTGACCCTGGTGGCGGTCAGCGTGATCGTCATTCTGCTGTCGACGGT
GGTGCCGAAGGTTGTCGAGCAGTTTATCCACCTTAAGCAGGCGCTGCCGTTTTCCACCCGCCTGCTGATGGCGATGAGCG
ATGTGCTGCGCGCCGCCGGTCCGTGGCTGCTGCTGGCCGCCATGCTCATCGCTCTGCTGCTGCGCTACCTGCTGCAGCAG
CCGGCAAAGCGGCTGGCCTGGCACAGGCTGCTGCTGCGCCTGCCGCTGATTGGCCGGGTCGCGCGCAGCGTTAACAGCGC
CCGCTACGCCCGCACCCTGAGCATTCTCAACGCCAGCGCCGTTCCGCTGCTGCTGGCGATGCGCATCAGCGCGGAAGTAT
TAAGCAACGCCTGGGCGAAGCGCCAGCTGGAAGCCGCCAGCGACGCGGTTCGCGAAGGCGTCAGCCTGCATCGCGCGCTC
GAAATGACCCAGCTGTTCCCGCCGATGATGCGCTACATGGTCGCCAGCGGCGAACAGAGCGGCGAGCTCAACGGCATGCT
GGAGCGCGCGGCGGATAACCAGGACCGGGATCTGAGCGCGCAAATTCAGCTGGCCCTCAGCCTGTTTGAACCTCTGCTGG
TGGTGGCGATGGCCGGCATGGTGCTGTTTATCGTCCTCGCCATCCTGCAACCGATACTGCAGCTCAATACCCTGATGAGT
ATGTAA

Protein sequence :
MALFRYQAVDENGKTRRGVQQADSARHARQLLREKGWLALDITPAAGSGGQPRFIRRTNARDLALLTRQLATLVAAAIPL
EKALDAVAQQCEKNQLKTLIAGVRGKVLEGHSLAEAMRGYPGCFDALYCAMVAAGEASGHLDGVLNRLADYTEQRQQLRA
RLLQAMIYPIVLTLVAVSVIVILLSTVVPKVVEQFIHLKQALPFSTRLLMAMSDVLRAAGPWLLLAAMLIALLLRYLLQQ
PAKRLAWHRLLLRLPLIGRVARSVNSARYARTLSILNASAVPLLLAMRISAEVLSNAWAKRQLEAASDAVREGVSLHRAL
EMTQLFPPMMRYMVASGEQSGELNGMLERAADNQDRDLSAQIQLALSLFEPLLVVAMAGMVLFIVLAILQPILQLNTLMS
M

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspF CAE85232.1 GspF, hypothetical type II secretion protein Not tested PAI V 536 Protein 3e-76 57
gspF YP_854405.1 type II secretion protein GspF Not tested PAI I APEC-O1 Protein 5e-77 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KOX_11300 YP_005018225.1 pullulanase F protein VFG2049 Protein 5e-73 57
KOX_11300 YP_005018225.1 pullulanase F protein VFG1870 Protein 2e-59 42