Gene Information

Name : KOX_11000 (KOX_11000)
Accession : YP_005018165.1
Strain : Klebsiella oxytoca KCTC 1686
Genome accession: NC_016612
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2361993 - 2363378 bp
Length : 1386 bp
Strand : -
Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

DNA sequence : 
ATGAAAACTGAACAATTGATACCTCTTTGCCAGCGCTATCAGGCCTTACTGCTCGATAGCAATGAACACACCATCGCTAT
CGCCGTGGTTGACGCCCCCGCCCCGGAGCTGCTGGAAGCGTTACGTTTCGCGACGCAGAAAAGGATTGATATCGAGTGCT
GGAGCCAGGACCAGATGGACAAGCGGCTGCAGACGCCGGGAATATCAACCCTCACCCCGCCTGTTGAAGCCTCGGCCAGC
ATCGTTGAACAGGTAAATAGCCTTCTGGAACAGGCCCTGCGCCAGCGCGCATCGGATATTCATATTGAACCCGGTGACGA
TCGCCTGAGAATTCGCCTGAGGGTAGATGGCGTACTCCATTCTCTTGCGCCGCTTGCGCCGGAACTCGCCGCCCCCATCA
CCGCCCGACTTAAAGTGCTCAGCAATCTGGATATCGCTGAACACCGGGTACCGCAGGACGGTCAGTTTACCCTCACGCTC
GCAGACCGCCCGATCTCGTTTCGGATCGCCACGCTTCCCTGCCGCGGCGGGGAAAAAATCGTCCTTCGCTTATTACACCA
GGTCGAACAAGCGCTGGACCTCGAAGCGCTGGGGCTATCGTCTCAGCAGCTTGCCGCCTTTCGCTCGGCGCTTAACCAAC
CTCAGGGGCTGATGCTGGTCACCGGCCCGACGGGAAGTGGGAAAACCGTCACTTTGTATAGTGCGCTGCAGGCGCGGAAT
CGCGACGAGGTCAATATATGCAGCGTTGAAGATCCGCTGGAGATCCCCATCGTGGGGATGAATCAGACGCAGATTAATCC
GCGGGCGGGCTTAACCTTTCACAGCGTACTGCGCGCCCTGCTACGCCAGGATCCCGATATCGTGATGGTCGGGGAGATAC
GCGATGCAGAAACCGCTGAAATTGCGATAAAAGCAGCGCAAACCGGGCACCTGGTTCTCTCAACGCTGCACACCAATTCA
ACCAGTGAAACGCTGGTTCGCCTGCAGCAGATGGGCGTTGCGCGCTGGATGATCTCATCCGCGCTTTCTCTGGTGGTTGC
TCAACGCCTGGTACGGAAACTGTGCCCGCACTGCCGCCGGGAAACCGGCAGTTCGGCCGATGTTCCACACAGCCTGTGGC
CGCGGGCGCTTCCTCGCTGGCAGGCTCCGGGCTGCCAGCACTGCTATCACGGCTACTACGGTCGCCTGGCGCTATTTGAG
CTGCTCCCCGTCACCACCGCGTTACGGCAGGCGATTACTCAGGGTCTTAGCGCCGGAGAGATCGAGTCCCTGGCGCGCGA
ATCCGGCATGATGACGCTGTTTGAGAGCGGCTGTCTGGCCGTCGAACGTGGGATGACAAGTCTGGAAGAGGTCGTTCGCG
TGTTGGGGATACCGCATGGCGACTAA

Protein sequence : 
MKTEQLIPLCQRYQALLLDSNEHTIAIAVVDAPAPELLEALRFATQKRIDIECWSQDQMDKRLQTPGISTLTPPVEASAS
IVEQVNSLLEQALRQRASDIHIEPGDDRLRIRLRVDGVLHSLAPLAPELAAPITARLKVLSNLDIAEHRVPQDGQFTLTL
ADRPISFRIATLPCRGGEKIVLRLLHQVEQALDLEALGLSSQQLAAFRSALNQPQGLMLVTGPTGSGKTVTLYSALQARN
RDEVNICSVEDPLEIPIVGMNQTQINPRAGLTFHSVLRALLRQDPDIVMVGEIRDAETAEIAIKAAQTGHLVLSTLHTNS
TSETLVRLQQMGVARWMISSALSLVVAQRLVRKLCPHCRRETGSSADVPHSLWPRALPRWQAPGCQHCYHGYYGRLALFE
LLPVTTALRQAITQGLSAGEIESLARESGMMTLFESGCLAVERGMTSLEEVVRVLGIPHGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 7e-73 47
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 5e-73 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KOX_11000 YP_005018165.1 hypothetical protein VFG2048 Protein 3e-75 48
KOX_11000 YP_005018165.1 hypothetical protein VFG2426 Protein 3e-71 46
KOX_11000 YP_005018165.1 hypothetical protein VFG0182 Protein 2e-69 45
KOX_11000 YP_005018165.1 hypothetical protein VFG1876 Protein 1e-71 45