Gene Information

Name : KOX_09950 (KOX_09950)
Accession : YP_005017955.1
Strain : Klebsiella oxytoca KCTC 1686
Genome accession: NC_016612
Putative virulence/resistance : Virulence
Product : IbrB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2125387 - 2126013 bp
Length : 627 bp
Strand : +
Note : COG1475 Predicted transcriptional regulators

DNA sequence :
ATGTCGCCGGATGTGGCTAAGACAGTGATTGAATATCTCGAGTCGTTTGACGATGTTGACCTGAAAATCAAAGCAATTAA
CGAACTGAAGAGCCTGATCCACCAGCACAGTCCCTTCTGCCGCGAGCCGGTGGACTGCGTGCTGTGGGTCGAGGCCAAAA
CGGTTGAGGCGAATGACTACAACCCCAACGTGATGGCGACGGTGGAAAAAAAGCTGCTGGAACGCTCTATCGAACTGGAT
GGTTTTACCCAACCGGTAGTGGTGGCTCGCCAGCAGCGACGGCACCTGGTCGTGGACGGTTTTCATCGCCATCTGATTGG
TAAGAGTCGCCCGGAGCTGAACCGGCGCCTGCATGGTTATCTTCCGGTGACGCTCATCAATGCCGAACGCGAAGGGCAGA
AAGAGCGCATCGCCGCCACCATTCGCCATAATCGCGCCAGGGGCAAACATCAGATCGCGGCGATGTCCGATATCGTCCGC
GATTTACATCGCCAGGGCTGGGACGATCGGCGCATCGGCGAAGAGCTCGGTATGGATGCAGACGAGGTGCTGCGCCTGAA
ACAGATCAGCGGCCTGACGGAGCTGTTCGCCGACGAGAGCTTTAGTGAAGCCTGGACCGTGGAGTAG

Protein sequence :
MSPDVAKTVIEYLESFDDVDLKIKAINELKSLIHQHSPFCREPVDCVLWVEAKTVEANDYNPNVMATVEKKLLERSIELD
GFTQPVVVARQQRRHLVVDGFHRHLIGKSRPELNRRLHGYLPVTLINAEREGQKERIAATIRHNRARGKHQIAAMSDIVR
DLHRQGWDDRRIGEELGMDADEVLRLKQISGLTELFADESFSEAWTVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 4e-55 68
ORF_30 AAZ04440.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 8e-43 65
APECO1_3503 YP_854305.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-42 65
c5208 NP_757056.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-42 65
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 2e-55 64
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 2e-56 62
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 9e-57 62
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 9e-57 62
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 4e-58 62
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 2e-56 62
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 1e-30 49
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 2e-30 49
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 6e-28 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KOX_09950 YP_005017955.1 IbrB VFG1505 Protein 2e-58 62