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Name : KOX_00970 (KOX_00970) Accession : YP_005016178.1 Strain : Klebsiella oxytoca KCTC 1686 Genome accession: NC_016612 Putative virulence/resistance : Virulence Product : fimbrial usher protein Function : - COG functional category : - COG ID : - EC number : - Position : 207777 - 210182 bp Length : 2406 bp Strand : - Note : COG3188 P pilus assembly protein, porin PapC DNA sequence : ATGGCTTGTGCCTCAACCGACGTGGAATTCAATACCGACGTACTGGATGCCGCCGATCGCGACAATATCGATTTAACCCG TTTCGCCACCGACAACTATGTCCCGCCGGGCGAGTACTTATTAGATATTAAAATAAATGGCCAGGCGGTGGGGCAGCAAA AGGTTCGCTATCTGGCTTCTAAGGACCAGAAGCATACCCAGGCCTGCATTAACGGCGAAATTCTTGCCAGATTGGCGTTG AAAGAAGAAGCGCAGAAAAAGGTCGCACAGCCGTTTGCCGATTGCTATGACCTGCTGAGCCTTCCTGGCGCTACGCTCAG CAACTACGCCGGGGTGCTGGACATCACGGTCCCGCAGGCGTGGATGAAATACAACGATCCGAACTGGACGCCGCCGGAGC GCTGGGACCAGGGCATAGGTGGGTTTTTGCTCGACTACAGTCTGACCGGGCAATATACCCGCCAGCTTGATATGCATGAA GATTACACCACCCTGAGCGGATACGGCCAGACCGGGTTTAACCTCGGCGGCTGGCGTTTGCGCGGCGAATATCAGACCAG CTATTACAGCGCGACGCATCAATTTGATTTCGACATGAATCAGATCTACGCCTACCGTCCGCTGCCGATGATGGCGGCAA AGCTGACGGCGGGGGAGATCTACCTTGATTCTCAGGTCTTCGACACCGTGCGCTTTACCGGGCTTAATCTCGCCAGCGAT GAGCGTCAGCTGCCGCCAAACCTGCAGGGCTACGCGCCGGAAATTCGCGGCCTGGCCAAGACCAACGCCAAAGTGACGGT GAAGCAGAGCGGGCGCATTATTTATGAAACGACGGTTCCCGCCGGGCCGTTTAACATTCAGGATTTACGCAGTTCGGTGC GCGGTACGCTGGATGTTCAGGTGGAGGAGCAGGACGGTTCCATTTCGACGTTCCAGGTTAACACCGCCAACATTCCTTAC CTTACGCGTCCCGGCTACGTGCGTTACAACGTGGCTGTCGGCGCGCCGTCCCGCTATAACCATAAAATTCAGGGGCCAGG TTTCGCTTCCGGTGATTTCTCCTGGGGGATAACCAACGCCTGGTCGCTGTACGGTGGTTTACAAAGCGCAGGGGCGGAAT ATACCGCGGTCTCCGCCGGTATTGGCCGCGATCTCAGCGTACTGGGCGCGCTCTCGCTGGACGCCACCGAATCCTACAGC CAGCAGTCAAACCAGAAGCGGCTTAAAGGCACCTCGTTTAAGCTGAGCTATGCGAAAACGTTCGACGAATATAACAGTTC AATTACCTTCGCCGGCTATCGCTTCTCTCAGGAAGATTTCCGCTCTTTCTCGCAATATCTCAACGAGCGTTACGAGGGTT ACGACAGCCTTGGCCGTGAAAAAGAAGTCTATACCATCACCGGGAATAAAACGTTCTGGGCCGATGAGCCAGGCAAAGCG ACCACCGTCTTTCTGACCTATACCCACCAGAATTACTGGAATCGAAGCAGCCAGGATCGCTACGGCATCTCGTTAGGGCG CTCGTTTAACGTCGGTAATATTCGCGGGATCACCACCAATATTTCGGCCTACCGTTCCGATTACGAAGGGCGTAAAGACG ACTCTATTGCTTTCTCGCTTTCCATTCCCGTTGGCGATAGCAAATGGAGCGGTCTCGACGTACAGACCAATAACGGCAAA ACCAGCCCGATGCTCTCGTACACCGACAGCAGCGACTACAACAACCTGTGGCGACTGCGTGCCGGGGCGAGCCAGAGCGG CTATGCCAACGTCGACGGCTACTATCAGCGCCGCTCGCAGTATGCCGAAATCAACAGCAACGCCAGCTATCAGCAGGATC ACTACGTTTCCCTGAGCAGCACCCTGCGCGGCGGCTTTACCGCTACCCGGCACGGGGCGGCGATCCACAACAGCGGCGCG ACGCTTAACACGGCGCGCGTGATGGTGAATACCAACGGTATCGGCGACGTTCCGCTCAATGACGGTAAATCAAGAACCAA CAATTTCGGTATTGCCGTTATTCCGGACATCGTGAGCTACAACAGCTTTGATACCCGCGTTGATGTCGATGCGATGTCGG AATCCATCGAACCGGCAAAGGCCATCAGCACTGCCACGCTGACCGAAGGCGCCATTGGCTATCAGACCTTTGGCATGGCG AAGGGCGAAAAAATGATGGGGATTATTCGCCTGGCTGACGGTACCTATCCACCGTTCGGCGCGGAGGTTATCAACGGCGA TGGCGTGAGCGTCTCCATGATTATGGAAGGTGGCCAGGGATGGCTGGCGGGGGTTAATCCTCAGGAGCTGCTAAGCGTAG TGTGGAGCGGGAAAAAGCAGTGCCAGATTGCCATCCCGCCGACCATCGTGCGTCGTTCGACAGCCGCGCTATTGCCGTGT AAATGA Protein sequence : MACASTDVEFNTDVLDAADRDNIDLTRFATDNYVPPGEYLLDIKINGQAVGQQKVRYLASKDQKHTQACINGEILARLAL KEEAQKKVAQPFADCYDLLSLPGATLSNYAGVLDITVPQAWMKYNDPNWTPPERWDQGIGGFLLDYSLTGQYTRQLDMHE DYTTLSGYGQTGFNLGGWRLRGEYQTSYYSATHQFDFDMNQIYAYRPLPMMAAKLTAGEIYLDSQVFDTVRFTGLNLASD ERQLPPNLQGYAPEIRGLAKTNAKVTVKQSGRIIYETTVPAGPFNIQDLRSSVRGTLDVQVEEQDGSISTFQVNTANIPY LTRPGYVRYNVAVGAPSRYNHKIQGPGFASGDFSWGITNAWSLYGGLQSAGAEYTAVSAGIGRDLSVLGALSLDATESYS QQSNQKRLKGTSFKLSYAKTFDEYNSSITFAGYRFSQEDFRSFSQYLNERYEGYDSLGREKEVYTITGNKTFWADEPGKA TTVFLTYTHQNYWNRSSQDRYGISLGRSFNVGNIRGITTNISAYRSDYEGRKDDSIAFSLSIPVGDSKWSGLDVQTNNGK TSPMLSYTDSSDYNNLWRLRAGASQSGYANVDGYYQRRSQYAEINSNASYQQDHYVSLSSTLRGGFTATRHGAAIHNSGA TLNTARVMVNTNGIGDVPLNDGKSRTNNFGIAVIPDIVSYNSFDTRVDVDAMSESIEPAKAISTATLTEGAIGYQTFGMA KGEKMMGIIRLADGTYPPFGAEVINGDGVSVSMIMEGGQGWLAGVNPQELLSVVWSGKKQCQIAIPPTIVRRSTAALLPC K |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 2e-149 | 43 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 6e-149 | 43 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 7e-149 | 43 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 2e-149 | 43 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 4e-148 | 42 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 3e-148 | 42 |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 3e-150 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| KOX_00970 | YP_005016178.1 | fimbrial usher protein | VFG1548 | Protein | 1e-149 | 43 |
| KOX_00970 | YP_005016178.1 | fimbrial usher protein | VFG0884 | Protein | 3e-149 | 43 |
| KOX_00970 | YP_005016178.1 | fimbrial usher protein | VFG0895 | Protein | 3e-149 | 43 |
