Gene Information

Name : KOX_00965 (KOX_00965)
Accession : YP_005016177.1
Strain : Klebsiella oxytoca KCTC 1686
Genome accession: NC_016612
Putative virulence/resistance : Virulence
Product : fimbrial chaperone protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 207020 - 207721 bp
Length : 702 bp
Strand : -
Note : COG3121 P pilus assembly protein, chaperone PapD

DNA sequence :
ATGGGCGTTGTGATGCTGGCGGCGGTAAGCGGTACCGCTCAGGCAGGGGTTTCGCTGGATCGCACGCGTCTTATCATAAC
CGGTAAAGACAGCTCGGCGAGCGCGAATTTAACCAACACCAGCCCGGATATTCCTTTCCTCGCGCAATCGTGGGTTGAGG
ACAGCAAGGGCAACAAGATTACCTCTCCGCTGGTGGTGCTGCCGCCTTTACAGCGGATTAACGGCGGGCAAAAAGGGGTG
GCGCGGGTCACCAAAACTGATGGTATTAACCAGCTGCCGCAGGATCGGGAAAGCCTGTTTTATTTAAGCGTGCGCGAAAT
CCCGCCCAAGCCGGATAAAGCGAATGTCCTGCAGTTAGCCATGCAGTCGCGGATTAAATTATTTTACCGCCCGACGGCCA
TTATTCCCAAAAGCAAAAGCGAGATTTGGCAGGACCAGGTCGTCTTTCAAAAGAGCGGCAATAAGATGACCGCGCAAAAC
CCGACGCCCTATTACATCACCATTATTAGCTTGTCCCGCGTTAAGGGTGAAAAAATCACTAAGTTTCCGGGGATTATGAT
TGCGCCGAAGTCCAGCATGGAGTTCAGCGTAACCGACGGCGGCGTGCGAGATTTCGCCATGATGTATGTGAACGATTATG
GCGGTCATCCGGAGCTGAAATATCGCTGTGAAGGAAATACCTGTAAAGCGCTGCCGCCATAG

Protein sequence :
MGVVMLAAVSGTAQAGVSLDRTRLIITGKDSSASANLTNTSPDIPFLAQSWVEDSKGNKITSPLVVLPPLQRINGGQKGV
ARVTKTDGINQLPQDRESLFYLSVREIPPKPDKANVLQLAMQSRIKLFYRPTAIIPKSKSEIWQDQVVFQKSGNKMTAQN
PTPYYITIISLSRVKGEKITKFPGIMIAPKSSMEFSVTDGGVRDFAMMYVNDYGGHPELKYRCEGNTCKALPP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pixD CAE85158.1 PixD protein Not tested PAI V 536 Protein 7e-52 49
prfD CAD42028.1 PrfD protein Virulence PAI II 536 Protein 2e-49 44
papD YP_854253.1 pilus assembly protein chaperone PapD Virulence PAI I APEC-O1 Protein 5e-49 44
papD AAZ04423.1 P pilus chaperone Virulence PAI I APEC-O1 Protein 3e-49 44
papD NP_755464.1 PapD protein Virulence PAI I CFT073 Protein 4e-43 43
papD YP_002414014.1 Chaperone protein PapD Not tested Not named Protein 7e-49 43
papD AAL67413.1 PapD Virulence PAI II CFT073 Protein 5e-49 43
papD_2 NP_757033.1 PapD protein Virulence PAI II CFT073 Protein 7e-49 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KOX_00965 YP_005016177.1 fimbrial chaperone protein VFG1547 Protein 1e-49 44
KOX_00965 YP_005016177.1 fimbrial chaperone protein VFG0885 Protein 1e-43 43
KOX_00965 YP_005016177.1 fimbrial chaperone protein VFG0896 Protein 3e-49 43