Gene Information

Name : KOX_00800 (KOX_00800)
Accession : YP_005016144.1
Strain : Klebsiella oxytoca KCTC 1686
Genome accession: NC_016612
Putative virulence/resistance : Virulence
Product : iron transport system permease component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 173539 - 174393 bp
Length : 855 bp
Strand : +
Note : COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components

DNA sequence :
ATGCTGAGCGCGCTGATTGAACCTTTCCAGTTCTCCTTTATGGTCAACGCCATACTGGTGGCGGCGATCGTTGCCGTCCC
CTGCGCGCTGCTGTCGGTGTTTTTGGTGCTCAAGGGCTGGGCGCTGATGGGCGATGCCATGAGCCACGCGGTTTTTCCGG
GCGTGGTGGTGGCGTATATCCTCGGTATCCCCTTCGCCATCGGCGCGTTTATCGCCGGGTTGTTCTGCGCCATCGCCACC
GGTTATCTCGACGATAACAGCCGCATTAAGCGCGATACGATCATGGGCATCGTCTTTTCCGGGATGTTTGGCGCGGGCCT
GGTGCTGTACGTGTCGATTCAGTCGGAGGTCCATCTCGATCATATTCTGTTTGGCGACATGCTGGGTATTTCCGCCAGCG
ATATTGCGCAAACGTCGCTGATCGCGCTGGCGATTGCGCTGATAATCGGGCTTAAGTGGCGTGATTTTCTGCTGCACGCC
TTTGATCCGCAGCAGGCGAAGGCCAGCGGATTGCGCTGCGGGCTGCTGCATTATGGGCTGCTGTGCATGATTGCACTGAC
CATCGTGGCGACGCTGAAAGCGGTGGGGATCATTTTGTCGATTTCGCTGCTGATAGCGCCGGGGGCGATCGCTCTGCTGC
TGACGCGGCGTTTTGTCAGCGCCCTGCTGCTGGCGGTGGCGATAGCGTTAAGCTGTTCGCTGGGCGGCGTGTGGCTGTCG
TTTTATCTCGACAGCGCCCCGGCGCCGACCATTGTGGTGCTGTTTACCGTCCTGTTCGTTATAGCGTTTGTCTGGACGTC
GGTTCGCGATAGTCAAACCACGGCCCGTTCCGGCGAAGCCCCGGGTCGCGGCTGA

Protein sequence :
MLSALIEPFQFSFMVNAILVAAIVAVPCALLSVFLVLKGWALMGDAMSHAVFPGVVVAYILGIPFAIGAFIAGLFCAIAT
GYLDDNSRIKRDTIMGIVFSGMFGAGLVLYVSIQSEVHLDHILFGDMLGISASDIAQTSLIALAIALIIGLKWRDFLLHA
FDPQQAKASGLRCGLLHYGLLCMIALTIVATLKAVGIILSISLLIAPGAIALLLTRRFVSALLLAVAIALSCSLGGVWLS
FYLDSAPAPTIVVLFTVLFVIAFVWTSVRDSQTTARSGEAPGRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD NP_461785.1 permease Virulence SPI-1 Protein 3e-78 79
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 2e-78 79
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 5e-78 79
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 5e-78 79
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-78 79
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-30 42
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-30 42
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 1e-30 41
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-30 41
sitC NP_461784.1 permease Virulence SPI-1 Protein 2e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KOX_00800 YP_005016144.1 iron transport system permease component BAC0352 Protein 1e-78 79
KOX_00800 YP_005016144.1 iron transport system permease component BAC0442 Protein 3e-50 53
KOX_00800 YP_005016144.1 iron transport system permease component BAC0441 Protein 2e-28 42
KOX_00800 YP_005016144.1 iron transport system permease component BAC0351 Protein 9e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KOX_00800 YP_005016144.1 iron transport system permease component VFG0528 Protein 1e-78 79
KOX_00800 YP_005016144.1 iron transport system permease component VFG0527 Protein 9e-31 41