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Name : serS (BFO_1886) Accession : YP_005014755.1 Strain : Tannerella forsythia ATCC 43037 Genome accession: NC_016610 Putative virulence/resistance : Unknown Product : serine--tRNA ligase Function : - COG functional category : - COG ID : - EC number : - Position : 2002155 - 2003426 bp Length : 1272 bp Strand : + Note : identified by match to protein family HMM PF00587; match to protein family HMM PF02403; match to protein family HMM TIGR00414 DNA sequence : ATGTTGACAATAAAAGTTATCACAGAAAATCAGGACGAAGTCATTCGCCGGCTGGCCGTCAAGCATTACGATGCCAAGGA AATCACCGATAAGATTATCGCTGCGGATAAAATACGGCGCAATGCACAAACAACTTTAGATGCGAACCTGACCGAGGTCA ACCGGATTTCAAAAATGATCGGTTTGCTGATGAAAGACGGAAAAACGGCTGAAGCCGAAGAGGCTAAGAACGAGGTAGCC CGGCTGAAAGATACCAATAAAGAGTTGGAAGCAACGAAGACACAGGCCGAAGATGAAATCCATGAATATTTAGTTTCTAT TCCCAATATGCCGCATGAATCTGTGCCCGAGGGTAAAGGCGCTGAAGACAACGTGTGTGAAAAGAAAGGAGGCGTGGTGC CCGAACTTCATGCCGATGCTCTGCCTCACTGGGAATTGGCAAAAAAATACGACATTATTGATTTTGAACTTGGCGTTAAA ATCACCGGTTCGGGCTTTCCCGTTTATAAGGGAAAGGGAGCGCGGTTGCAGCGTTCACTCATCAATTTCTTCTTAGACAA TGCGCGTGAGGCCGGCTATCTTGAGATTGAACCGCCATACGTCGTAAATACGGAATCGGGCTACGGAACGGGGCAGTTGC CCGACAAAGAAGGTCAGATGTATCATGTCGGTCTGGACGATTTGTATCTGATCCCGACCGCAGAGGTGCCGGTTACGAAT ATTTACAGAGATGTGATTTTAAATGAGGCGGATCTTCCCATCAAAAATACGGCTTATTCGGCTTGCTTCCGTCGCGAGGC CGGTTCGTACGGAAAAGATGTGCGGGGCTTAAACCGTTTGCATCAATTCGACAAGGTCGAGATCATCCGTATCGATAAGC CCGAACACTCGTATCAATCCTTGCAGGAGATGCTCGATTATGTTCAGACGCTTGTTGAAAAGTTAGAACTCCCGTGGCGC ATCCTGCGGTTGTGTGGCGGTGATCTCAGTTTCACTTCATCGCTGACGTTTGATTTCGAAGTGTATTCCGCTGCACAGAA ACGGTGGCTCGAAGTCAGCTCGGTGTCTAACTTCGAGAATTATCAGGCCAACCGCCTGAAATGTCGCTATCGCGATGCCA ATAAAAAGGTTCAGCTCTGTCATACGCTTAACGGAAGCGCTTTGGCCTTACCTCGTATCGTTGCGGCTTTGCTGGAGAAT AATCAGACACCGAACGGTATCCGGATTCCTCAAGCGCTCATTCCTTATACAGGGTTTGAACTGATTGACTGA Protein sequence : MLTIKVITENQDEVIRRLAVKHYDAKEITDKIIAADKIRRNAQTTLDANLTEVNRISKMIGLLMKDGKTAEAEEAKNEVA RLKDTNKELEATKTQAEDEIHEYLVSIPNMPHESVPEGKGAEDNVCEKKGGVVPELHADALPHWELAKKYDIIDFELGVK ITGSGFPVYKGKGARLQRSLINFFLDNAREAGYLEIEPPYVVNTESGYGTGQLPDKEGQMYHVGLDDLYLIPTAEVPVTN IYRDVILNEADLPIKNTAYSACFRREAGSYGKDVRGLNRLHQFDKVEIIRIDKPEHSYQSLQEMLDYVQTLVEKLELPWR ILRLCGGDLSFTSSLTFDFEVYSAAQKRWLEVSSVSNFENYQANRLKCRYRDANKKVQLCHTLNGSALALPRIVAALLEN NQTPNGIRIPQALIPYTGFELID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-69 | 43 |
