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Name : clpC (BFO_1740) Accession : YP_005014610.1 Strain : Tannerella forsythia ATCC 43037 Genome accession: NC_016610 Putative virulence/resistance : Virulence Product : negative regulator of genetic competence ClpC/MecB Function : - COG functional category : - COG ID : - EC number : - Position : 1853233 - 1855797 bp Length : 2565 bp Strand : - Note : identified by match to protein family HMM PF00004; match to protein family HMM PF02151; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728 DNA sequence : ATGAAGAACAATTATTCAAAAAAAGTGATCGACGTGATTGAATACAGTCGCGAAGAGGCTGCTCGTTTACAGAACAGCTA CATTGGTCCGGAGCATTTGATGCTGGGCCTGCTGCGCGAAGGCAATGGGAACGCCGTAACCATTCTTCAGGAGATGAATG CGGACTTGACACAGATCAAAAAAGAGATCGAACACGAAATACGAAATACGTATGAAACGGGCGAAATGCCACTCAATGAT ATTACCATCAGCAAAAGTACCGAACGTGTATTGCGCATGAGCATGCTCGAAGCCCGGATCTTTAAAAGCGAACGTACGCG AACCGAACACCTGCTGCTGGCACTCCTGAAAGAGGAGTTTAATACGGCGGCACAGATTTTGGGACGAACGGGTATTGATT ATCACGCCGTCTACGGTCGCGTGAGCGGTGAATCCGATATCGATATCGCGGAGATCGAAGAAGTTCGCGACGGGTTTACC GACGATGATGAGGAAGAAGACGATGCCTTTTCATCGTCGTATTCTTCGTCTTCCTCGGGGCAGTCGACACCGGGAGGCAT GGTGCGCGGCGCAGCCGGCACTTCGCAGAAAGTGTCGAACGATACGCCGGTGCTCGACAATTTCGGCTCGGATATGACGC GGGCGGCTGCCGAAGGAAAGTTGGACCCGATCGTTGGACGCGAGAAGGAGATTGAACGGCTGGCACAGATTCTGAGCCGT CGGAAGAAGAACAATCCCGTGCTGATCGGCGAGCCGGGCGTCGGGAAATCGGCGATTGTCGAAGGGCTGGCACAGCGCAT CGTTCAGCGCAAGGTGTCGCGCATCCTGTTCGACAAGCGGGTGATTAGCCTCGACATGGCCTCCATCGTGGCCGGAACGA AGTATCGCGGGCAGTTTGAAGAGCGCATCAAGGCCGTACTGAACGAGCTGACAAAAAATCCGAATATCATTCTGTTCATC GACGAAATCCACACGCTTGTCGGGGCCGGTTCGGCTTCGGGCTCAATGGATGCCGCCAATATGCTTAAGCCTGCATTGGC ACGGGGTGAGCTGCAATGTATCGGCGCTACGACACTCGATGAGTATCGGAAGAACATCGAGAAGGACGGAGCATTGGAAC GCCGTTTCCAGAAGGTGCTCGTCGACCCGACCACCCCCGAAGAAACCTTGCAGATTCTCAAAAATATCAAGGAACGGTAT GAAGAACATCATCATATGATCTATACCGATGCGGCGCTTGAAGCATGTGTCAAACTGACGGAACGCTACATCAGCGACCG CAATCTCCCCGACAAGGCCATCGATGCACTGGACGAGGCCGGATCACGCGTGCATATCTCGACCATTGTCGTACCCCGGC ATATCGAAGAGCTGGAAGCGAAGATCGAAGCGACCCGAAATGACAAACTAGCGGCTGTGAAATCGCAGAATTTTGAGCTG GCGGCAAGCCATCGCGATACCGAACGGCAATACATCATCGAACTGGAAGCGGCCAAGCATAAATGGGAAGAAGAGATGCA GGAACATCGCGAGACGGTCGATGCCGAGCAAGTGGCGGAGGTGGTGGCGATGATGTCGGGAGTACCCGTGCAACGTATTG CACAGACGGAAAACATACGACTGCGTGACATGGGGGCACTGCTCAAGGAAAAGATCATCGGGCAAGATGAAGCCGTAGAA AAGATCGTTAAAGCCATTCAGCGTAACCGCGTCGGACTGAAAGACCCGAACAAACCCATCGGCACCTTCATGTTCTTAGG ACCTACGGGAGTAGGCAAAACGCATCTGGCCAAAAAACTGGCCGAGTTCCTGTTCGACACACCCGATGCGCTGATCCGAA TCGACATGAGCGAGTACCTTGAAAAGTTCGCCGTCTCGCGTCTTATCGGAGCACCTCCGGGATACGTCGGCTATGAAGAA GGCGGACAGCTGACCGAAAAGGTGCGTCGCAAACCCTATTCCGTTGTGCTGCTCGACGAGATCGAGAAAGCGCACCCCGA CGTGTTCAACCTCTTGCTTCAGGTGCTCGACGAGGGACGGCTGACCGACAGCCTCGGACGCCGCATTGACTTCAAAAATA CGATTCTGATCATGACATCCAATATCGGGACGCGCCAGTTAAAAGACTTCGGACGGGGCATCGGCTTCCATCCGCAGCGA CAGGGGCTGATGGACAAAGATTATTCGCGCGGCGTGATTCGTAAAGCGCTGGAAAAGTCGTTCGCACCCGAATTTCTGAA CCGTATCGACGATATTGTCATGTTCGATCCGCTGGACAAAACCTCGATTCACCGGATTATTGACATCGAACTGAAAGAAG TCTATCGACGGATCGACGAGCTCGGCTACCGTCTGGAAATTACGGACGAAGCGAAGGAATACATCACCTCGAAAGGCTAT GATGTCCAGTTCGGTGCACGGCCGCTGAAACGCTCGATCCAGAAATATATCGAAGACGAGATGGCCGGCATCCTTCTGCA GGAAGATGTGACGCCGGGTGATACGATCGTAATCGGGCATGATCAGGCAACCGACAAAATGACACACGAAATCAAAAAGG CGTGA Protein sequence : MKNNYSKKVIDVIEYSREEAARLQNSYIGPEHLMLGLLREGNGNAVTILQEMNADLTQIKKEIEHEIRNTYETGEMPLND ITISKSTERVLRMSMLEARIFKSERTRTEHLLLALLKEEFNTAAQILGRTGIDYHAVYGRVSGESDIDIAEIEEVRDGFT DDDEEEDDAFSSSYSSSSSGQSTPGGMVRGAAGTSQKVSNDTPVLDNFGSDMTRAAAEGKLDPIVGREKEIERLAQILSR RKKNNPVLIGEPGVGKSAIVEGLAQRIVQRKVSRILFDKRVISLDMASIVAGTKYRGQFEERIKAVLNELTKNPNIILFI DEIHTLVGAGSASGSMDAANMLKPALARGELQCIGATTLDEYRKNIEKDGALERRFQKVLVDPTTPEETLQILKNIKERY EEHHHMIYTDAALEACVKLTERYISDRNLPDKAIDALDEAGSRVHISTIVVPRHIEELEAKIEATRNDKLAAVKSQNFEL AASHRDTERQYIIELEAAKHKWEEEMQEHRETVDAEQVAEVVAMMSGVPVQRIAQTENIRLRDMGALLKEKIIGQDEAVE KIVKAIQRNRVGLKDPNKPIGTFMFLGPTGVGKTHLAKKLAEFLFDTPDALIRIDMSEYLEKFAVSRLIGAPPGYVGYEE GGQLTEKVRRKPYSVVLLDEIEKAHPDVFNLLLQVLDEGRLTDSLGRRIDFKNTILIMTSNIGTRQLKDFGRGIGFHPQR QGLMDKDYSRGVIRKALEKSFAPEFLNRIDDIVMFDPLDKTSIHRIIDIELKEVYRRIDELGYRLEITDEAKEYITSKGY DVQFGARPLKRSIQKYIEDEMAGILLQEDVTPGDTIVIGHDQATDKMTHEIKKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 9e-163 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_005014610.1 | negative regulator of genetic competence ClpC/MecB | VFG0079 | Protein | 9e-177 | 55 |
| clpC | YP_005014610.1 | negative regulator of genetic competence ClpC/MecB | VFG0080 | Protein | 8e-148 | 49 |
