|
Name : BFO_1235 (BFO_1235) Accession : YP_005014136.1 Strain : Tannerella forsythia ATCC 43037 Genome accession: NC_016610 Putative virulence/resistance : Unknown Product : elongation factor Tu GTP binding domain-containing protein Function : - COG functional category : - COG ID : - EC number : - Position : 1331023 - 1332960 bp Length : 1938 bp Strand : + Note : identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF03764 DNA sequence : TTGCTTAATCAAATGAACATTATAAATTTAGGAATTCTTGCTCACATTGATGCAGGAAAAACTTCCGTAACCGAAAATCT GCTATTTGCCTGCGGAGCAACGGAAAAGCGCGGCAGTGTTGATAAAGGTGACACCATAACAGACTCTATGGATATAGAAA AACGTAGAGGAATTACTATTCGGGCTTCTACGACATCTATTGTTTGGAATGGTGTGAAATGCAATATCATTGACACTCCG GGACACATGGATTTTATTGCAGAGGTGGAGCGGACATTCAAAATGCTTGATGGAGCAGTCCTCATATTATCGGCAAAGGA AGGCATACAAGCACAAACAAAGTTGCTGTTCAAGACTTTGCAAAAACTGCAAATCCCGACAATTATATTTATCAATAAGA TTGATCGTGCCGGCGTAAATCTTGAGCGTTTATATCTGGACATAAAAACAAATCTGTCGCAAGACGTCTTGTTTATGCAA ACGGTTGTCGATGGAGTAGTTTACCCGATTTGCACCTCAACAGATATAAGGGCAGAACACAAAGAATTTGTATGCAACCA TGACGACGATATATTAGAACTATATTTGGCGGATAAAGAAATCTTACCGGCAGATTATTGGAATGCGATAATCGCTCTTG TGGCAAAAGCCAAAGCCTATCCGGTCTTGCATGGATCAGCAATGTGCAATATTGGCATCAATGAGTTGTTAGACGCCATC ATTTCTTTTATATTTCCTCCGGCATCAGTCCCAAATAGACTTTCAGCTTATCTTTATAAAATAGAACATGACCCCAAAGG GCATAAAAGAAGTTTTCTAAAAATTATTGACGGAAGTCTGAGACTTCGAACCGTTATAAAAGTCAATGATTCGGAAAAAT TCATCAAGATTAAAAATCTAAAAACCATTTATCAGGGCAAAGAGATAAATGTTGATGAAGTGGTTGCTAATGATATCGCA ATTATAGAAGATATAGAAGAATTAAGAATCGGAGATTATTTAGGTGTTAAACCTTGTCTGATTCAAGGATTATCTCATCA GCATCCCGCCCTCAAATCTTCTGTCCGACCAGACAAGCCCGAAGAGAGAAGCAAGTTGATATCCGCTCTAAATGTATTGT TTATTGAAGACCCGTCTCTGTCCTTTTCCATAAATTCATATAGTGATGAATTGGAAATCTCGTTATATGGTTTAACCCAA AAAGAAATCATACAAACATTGCTGGAAGAACGATTCTCCGTAAAGACCCATTTTGATGAAATCAAGACTATCTACAAAGA ACGACCTAAAAAGAAGGTGAATAAGATTATCCATATCGAAGTCCCTCCCAACCCTTACTGGGCCTCAATAGGACTGACTC TGGAACCTTTACCGATAGGGTCAGGGGTGCAAATCGAAAGTGAAATCTCCTTTGGTTATCTGAACCATTCTTTTCAAAAT GCCGTTTTTGAAGGAATCCGTATGTCTTGCCAATCGGGATTGCATGGATGGGAAGTGACGGATTTGAAAGTAACCTTTAC TTATGCCCTTTATTATAGTCCGATAAGTACCCCTGCCGATTTTAGACAATTGTCTCCTTATGTCTTCAGGTTGGCTTTGC AACAATCAGGAGTGGATATTCTCGAACCGATGCTCTATTTTGAGTTACAGATACCACAAGTAGCAAGTTCCAAAGCTATT ACAGATCTGCAAAAAATGATGTCTGAGATTAAAGGTATCAGTTGTAATAAAGAGTGGTGTCTTATTGAAGGGAAAGTTCC ATTAAATACAAGTAAAGACTATGCTTCAGAAGTAAGTTCATACACTAAAGGCTTAGGCACTTTTATGGTTAAGCCGTGTG GGTATCAAATAACAAAAGGCGGTTATTCTGATAATACCCGTATGGAAGAAAAGGATAAACTTTTATTCATGTTTGAAAAA TCAGTATCATCAAAATAA Protein sequence : MLNQMNIINLGILAHIDAGKTSVTENLLFACGATEKRGSVDKGDTITDSMDIEKRRGITIRASTTSIVWNGVKCNIIDTP GHMDFIAEVERTFKMLDGAVLILSAKEGIQAQTKLLFKTLQKLQIPTIIFINKIDRAGVNLERLYLDIKTNLSQDVLFMQ TVVDGVVYPICTSTDIRAEHKEFVCNHDDDILELYLADKEILPADYWNAIIALVAKAKAYPVLHGSAMCNIGINELLDAI ISFIFPPASVPNRLSAYLYKIEHDPKGHKRSFLKIIDGSLRLRTVIKVNDSEKFIKIKNLKTIYQGKEINVDEVVANDIA IIEDIEELRIGDYLGVKPCLIQGLSHQHPALKSSVRPDKPEERSKLISALNVLFIEDPSLSFSINSYSDELEISLYGLTQ KEIIQTLLEERFSVKTHFDEIKTIYKERPKKKVNKIIHIEVPPNPYWASIGLTLEPLPIGSGVQIESEISFGYLNHSFQN AVFEGIRMSCQSGLHGWEVTDLKVTFTYALYYSPISTPADFRQLSPYVFRLALQQSGVDILEPMLYFELQIPQVASSKAI TDLQKMMSEIKGISCNKEWCLIEGKVPLNTSKDYASEVSSYTKGLGTFMVKPCGYQITKGGYSDNTRMEEKDKLLFMFEK SVSSK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tet(W) | YP_005160006.1 | tetracycline resistance protein | Not tested | Not named | Protein | 6e-98 | 42 |
| SSU05_0922 | YP_001198287.1 | translation elongation factor (GTPases) | Not tested | 89K | Protein | 2e-102 | 41 |
| SSU98_0928 | YP_001200485.1 | translation elongation factor (GTPases) | Not tested | 89K | Protein | 2e-102 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BFO_1235 | YP_005014136.1 | elongation factor Tu GTP binding domain-containing protein | Z21523.gene.p01 | Protein | 0.0 | 90 |
| BFO_1235 | YP_005014136.1 | elongation factor Tu GTP binding domain-containing protein | AJ514254.gene.p01 | Protein | 0.0 | 62 |
| BFO_1235 | YP_005014136.1 | elongation factor Tu GTP binding domain-containing protein | L42544.gene.p01 | Protein | 4e-134 | 48 |
| BFO_1235 | YP_005014136.1 | elongation factor Tu GTP binding domain-containing protein | AJ295238.gene.p01 | Protein | 2e-105 | 43 |
| BFO_1235 | YP_005014136.1 | elongation factor Tu GTP binding domain-containing protein | FN594949.1.gene24.p0 | Protein | 2e-95 | 42 |
| BFO_1235 | YP_005014136.1 | elongation factor Tu GTP binding domain-containing protein | DQ294299.gene.p01 | Protein | 8e-97 | 42 |
| BFO_1235 | YP_005014136.1 | elongation factor Tu GTP binding domain-containing protein | AJ222769.gene.p01 | Protein | 3e-98 | 42 |
| BFO_1235 | YP_005014136.1 | elongation factor Tu GTP binding domain-containing protein | M85225.gene.p01 | Protein | 1e-104 | 42 |
| BFO_1235 | YP_005014136.1 | elongation factor Tu GTP binding domain-containing protein | NC_002758.1120355.p0 | Protein | 5e-106 | 42 |
| BFO_1235 | YP_005014136.1 | elongation factor Tu GTP binding domain-containing protein | AY485126.gene.p01 | Protein | 1e-100 | 42 |
| BFO_1235 | YP_005014136.1 | elongation factor Tu GTP binding domain-containing protein | NC_009782.5559075.p0 | Protein | 5e-106 | 42 |
| BFO_1235 | YP_005014136.1 | elongation factor Tu GTP binding domain-containing protein | AM180355.1.gene636.p | Protein | 2e-95 | 41 |
| BFO_1235 | YP_005014136.1 | elongation factor Tu GTP binding domain-containing protein | X04388.gene.p01 | Protein | 1e-97 | 41 |
| BFO_1235 | YP_005014136.1 | elongation factor Tu GTP binding domain-containing protein | L09756.gene.p01 | Protein | 1e-96 | 41 |
