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Name : Niako_0966 (Niako_0966) Accession : YP_005006749.1 Strain : Niastella koreensis GR20-10 Genome accession: NC_016609 Putative virulence/resistance : Unknown Product : D-xylose isomerase Function : - COG functional category : - COG ID : - EC number : - Position : 1179086 - 1180414 bp Length : 1329 bp Strand : + Note : PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase; COGs: COG2115 Xylose isomerase; HAMAP: Xylose isomerase; InterPro IPR001998:IPR012307:IPR013452; KEGG: cpi:Cpin_1929 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; PRIAM: Xyl DNA sequence : ATGAAAATCATTACAGGCGAAAAAGAATTCTTTAAAGGCATTGGCCAAATCAAATATGAAGGCGTGGAGAGCGATAACCC ACTGGCCTTTAAATGGTATGATGAAAACAGGGTAGTGGCTGGTAAAACCATGAAAGAGCATTTACGTTTTGCAGTGTGCT ACTGGCATACGTTCTGTAACACGGGAGCCGATCCGTTTGGTCCAGGTACAAAACATTTTGCGTGGGATGCAAATACCGAT GCCGTAGCACGTGCTAAAGATAAAATGGATGCTGCGTTTGAATTCATCACCAAACTGGGTGTTCCTTATTATTGTTTTCA CGATATCGACCTGGTTGATGAAGGCGCCAACATCAAGGAATATGAAAGCCGTTTGCAAACTATTGTAGATTACGCCAAAC AAAAACAGGCTGCCAGCGGTGTGAAATTATTATGGGGAACTGCCAATGTGTTCAGTAATCCCCGTTACATGAACGGTGCT TCTACCAATCCTGATTTTGCTGCAGTAGCTTATGCGGGTACGCAGGTAAAAAATGCGCTGGATGCTACCATCGCCCTGGG TGGTGAGAATTATGTGTTCTGGGGTGGCCGCGAAGGTTATATGAGCCTGCTGAACACGAACATGAAACGTGAGCTCGATC ACCTGGCGCAATTCCTCACTATGGCGCGTGATTATGCCCGCAAACAGGGTTTCAAAGGTGTGTTCTTTATTGAACCCAAA CCTTGCGAACCTACCAAGCACCAATACGATTATGACAGCGCAACCGTGATCGGTTTCCTGCGTCATTACGGGCTTGATAA AGACTTTAAACTGAATATTGAGGTAAACCATGCCACGCTGGCCGGGCATACCTTCCAGCACGAATTACAGGTAGCTGCCG ATGCAGGTATGCTGGGCAGCATCGATGCCAACCGCGGCGATGACCAGAACGGCTGGGATACCGATCAGTTCCCGGTTGAC CTGAACGAGCTGGTAGAAAGCATGCTCATCATCCTGGAAGCAAAAGGCTTTGCCGGTGGTGGAATTAACTTCGATGCCAA GACCCGCCGTAATTCAACCGACCTGGAAGATATCTTCATGGCGCACATTGGTGGTATGGACACTTTTGCCCGCGCCCTGG TAATTGCGGATAAAGTAATGCAGAAATCGCCTTACCTGAAGTTCCGCAAAGACCGCTATGCTTCTTTTGATAGCGGTAAA GGAAAAGAGTTTGAGACCGGCGCTTTAAAGCTGGAAGACCTGCGGGAGTTTGCCCTGTCGAATGGCGAACCCAAACAGAC CAGCGGTAAGCAGGAGTGGCTGGAGAATATCATCAATCAGTACATCTAA Protein sequence : MKIITGEKEFFKGIGQIKYEGVESDNPLAFKWYDENRVVAGKTMKEHLRFAVCYWHTFCNTGADPFGPGTKHFAWDANTD AVARAKDKMDAAFEFITKLGVPYYCFHDIDLVDEGANIKEYESRLQTIVDYAKQKQAASGVKLLWGTANVFSNPRYMNGA STNPDFAAVAYAGTQVKNALDATIALGGENYVFWGGREGYMSLLNTNMKRELDHLAQFLTMARDYARKQGFKGVFFIEPK PCEPTKHQYDYDSATVIGFLRHYGLDKDFKLNIEVNHATLAGHTFQHELQVAADAGMLGSIDANRGDDQNGWDTDQFPVD LNELVESMLIILEAKGFAGGGINFDAKTRRNSTDLEDIFMAHIGGMDTFARALVIADKVMQKSPYLKFRKDRYASFDSGK GKEFETGALKLEDLREFALSNGEPKQTSGKQEWLENIINQYI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 1e-104 | 52 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 8e-105 | 52 |
