Gene Information

Name : Niako_6570 (Niako_6570)
Accession : YP_005012197.1
Strain : Niastella koreensis GR20-10
Genome accession: NC_016609
Putative virulence/resistance : Resistance
Product : cystathionine gamma-lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 8086509 - 8087648 bp
Length : 1140 bp
Strand : -
Note : PFAM: Cys/Met metabolism PLP-dependent enzyme; COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: cpi:Cpin_0494 cystathionine gamma-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; PRIAM: C

DNA sequence :
ATGAGAACAGGAACTAAATTCATCCATGCCGGTTCGGAACCAGATCCATCAACCGGGGCAATTATGACGCCTATTTACCA
AACATCAACTTATGTGCAGGAAGCACCTGGTGTAAATAAAGGGTTTGAATATGCCCGCTCCCAAAACCCTACCCGGTTTG
CGCTGGAAGAAGCACTGGCAGTAATTGAAAACGGAAAATTCGGACTGGCATTCAGCAGTGGCGTTGCCGCTACTGACGCG
GTAATAAAACTGTTACAACCTGGCGATGAAGTAATTGCAGCCAACGACATGTATGGCGGCACGTACCGCCTGTTCACCAA
AATATTTGAAAAGTTTGGCATTAAGTTCCATTATGTGAACATGCAGGACGCGACGAACATAAAGCCACACATCAATAAGA
ACACCAAACTGATCTGGACGGAAACGCCCACCAACCCGCTGATAAATATTGTTGACATTGCCGCTGTAGCTGCTATTGCC
AAAGCAAACAACATTCTGCTGTGTGTAGATAACACCTTCGCATCGCCTTATCTGCAAACCCCATTAGACCTGGGTGCCGA
CATTGTAATGCACTCTGCTACCAAATACCTGGGCGGACATAGCGACGTTATTCAGGGCGCTTTGGTTATGAATGATCAGG
CATTGCGCGATCAGTTATACTTTATTCAAAAGAGTTGTGGCGCAGTACCAGGCCCCATGGATTGCTTTTTGGTTTTACGC
GGTATTAAAACCCTGCATGTGCGTATGCAACGCCATTGTGAGAACGGAGAAAAGATAGCTCACTTTTTACGCAATCATCC
TAAAGTAGGTCATGTATACTGGTGCGGCTTTACCGATCATCCGGGTTATGCGATTGCCAAAAAACAAATGCGTGGCTTTG
GTGGTATGATAAGCTTTACCTTAAAAGATGATAGTGTGGAAACTGCAAAGAAATTATTATCCTCTACCAAAGTGTTTGCA
CTGGCCGAAAGCCTTGGTGGTGTTGAATCACTGATCAATCATCCTGCAACCATGACGCATGCGTCTATACCACGCGAAGA
ACGCATTAAGAATGGCCTGAGCGATTCATTGATAAGATTGAGTGTGGGTATTGAAGACGCAGAGGATCTCATAGATGACC
TCAATGCAGCAATAGGATAA

Protein sequence :
MRTGTKFIHAGSEPDPSTGAIMTPIYQTSTYVQEAPGVNKGFEYARSQNPTRFALEEALAVIENGKFGLAFSSGVAATDA
VIKLLQPGDEVIAANDMYGGTYRLFTKIFEKFGIKFHYVNMQDATNIKPHINKNTKLIWTETPTNPLINIVDIAAVAAIA
KANNILLCVDNTFASPYLQTPLDLGADIVMHSATKYLGGHSDVIQGALVMNDQALRDQLYFIQKSCGAVPGPMDCFLVLR
GIKTLHVRMQRHCENGEKIAHFLRNHPKVGHVYWCGFTDHPGYAIAKKQMRGFGGMISFTLKDDSVETAKKLLSSTKVFA
LAESLGGVESLINHPATMTHASIPREERIKNGLSDSLIRLSVGIEDAEDLIDDLNAAIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-82 49
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 8e-84 49
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 2e-54 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Niako_6570 YP_005012197.1 cystathionine gamma-lyase BAC0207 Protein 2e-62 42