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Name : Niako_6559 (Niako_6559) Accession : YP_005012186.1 Strain : Niastella koreensis GR20-10 Genome accession: NC_016609 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 8071748 - 8073274 bp Length : 1527 bp Strand : - Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; COGs: COG1190 Lysyl-tRNA synthetase (class II); HAMAP: Lysyl-tRNA synthetase; InterPro IPR002313:IP DNA sequence : ATGAGTACACAACATTTGTCTGAACAGGAGATCATCAGACGGGAGAAATTACAGGAATTACAAAAGCTGGGTATCGATCC ATACCCCGCACCGCTTTACCCCGTGAATATTACTGCCGAAAAAATAAAGCAGGAATACAAGGGCGAAGAAAATAAAGCTG ATTTTGCCGATGTATGTCTGGCCGGCCGTATCATGAGCATTCGCGATATGGGTAAGGCTTCTTTTGCCAAAATGCAGGAC AGCACCGGAAGTATCCAGTTGTACATTAAACGCGATGAGATCTGCCCCGGTGAAGACAAAACGCTGTACGATAAAGTATG GAAACACCTCACTGATATCGGCGATATCTTTGGCGTGAAGGGTTATGTGTTCACCACCAAAACCGGTGAAACCTCTGTGC ATGTTACCGAGCTCACCTTCCTTACCAAATCGCTGAAACCATTACCGATCGTAAAGGAAAAAGACGGTGAAACCTTTGAT GCGGTTAGTGACCCCGAGTTCCGTTACCGCCAGCGGTATGTTGACCTGATCATTAATCCAACAGTTAAAGACACGTTTTT AAAACGCAGTCAGCTCATCAATACCATCCGTGATTTCCTGAATGCCCAGGGCGCCCTGGAGGTAGATACCCCGGTATTGC AGGCCATCCCAGGTGGTGCAGCCGCCCGCCCGTTCATTACGCACCACAATGCGCTGGATGTGCCGTTCTATTTGCGTATT GCCAATGAGCTGTACCTGAAACGCCTGATCGTAGGCGGGTTCGACTGGGTTTATGAGTTCAGCCGCAACTTCCGCAACGA GGGTATGGACCGTACGCATAACCCCGAGTTTACCGTGCTGGAATGGTATACTGCCTATAAAGATTATTTCTGGATGATGG AGATCACCGAACAACTGTTTGAGAAGATCGCCAACACCCTGCACAATTCTACTAAAGTTCAGGTAGGTGATAAAGAGATC GATTTCAAAGCGCCGTTCAAGCGCATCAGCATTTACGATGCTATTCAAGAGCACACCGGTTTTGACGTAAGCAACATGAA TGAAACCGAGTTGCGCGAGGTTTGCAAAAAGCTGAACATTCATACCGAAGCCAGCATGGGTAAAGGCAAACTGATAGATG AACTGTTTGGGAATAAATGCGAGATGCATTACATCCAACCCACTTTTATCATCGACTACCCGGTTGAAATGAGCCCGCTT ACTAAAAAGCACCGCAGCAAGGCCGGACTGGTGGAACGTTTTGAGCTGATGGTAAATGGTAAAGAGATCGCCAATGCATA CAGCGAGCTGAACGACCCCATCGATCAACGCGAGCGTTTTGAAGAACAGGCTGAACTGCTAAAGCGCGGTGATGATGAAG CCATGTATATAGACAATGACTTCCTGCGCGCTCTTGAATATGGGATGCCGCCTACCTCAGGTATTGGTATTGGTATTGAC CGATTGGTGATGCTGATGACCAACCAGCCCAGCATTCAGGATGTGCTGCTGTTCCCGCAAATGCGGCCTGAAAAAACAGG TGAGTAA Protein sequence : MSTQHLSEQEIIRREKLQELQKLGIDPYPAPLYPVNITAEKIKQEYKGEENKADFADVCLAGRIMSIRDMGKASFAKMQD STGSIQLYIKRDEICPGEDKTLYDKVWKHLTDIGDIFGVKGYVFTTKTGETSVHVTELTFLTKSLKPLPIVKEKDGETFD AVSDPEFRYRQRYVDLIINPTVKDTFLKRSQLINTIRDFLNAQGALEVDTPVLQAIPGGAAARPFITHHNALDVPFYLRI ANELYLKRLIVGGFDWVYEFSRNFRNEGMDRTHNPEFTVLEWYTAYKDYFWMMEITEQLFEKIANTLHNSTKVQVGDKEI DFKAPFKRISIYDAIQEHTGFDVSNMNETELREVCKKLNIHTEASMGKGKLIDELFGNKCEMHYIQPTFIIDYPVEMSPL TKKHRSKAGLVERFELMVNGKEIANAYSELNDPIDQRERFEEQAELLKRGDDEAMYIDNDFLRALEYGMPPTSGIGIGID RLVMLMTNQPSIQDVLLFPQMRPEKTGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 8e-99 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Niako_6559 | YP_005012186.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 4e-99 | 44 |
