|
Name : Niako_6509 (Niako_6509) Accession : YP_005012136.1 Strain : Niastella koreensis GR20-10 Genome accession: NC_016609 Putative virulence/resistance : Resistance Product : major facilitator superfamily protein Function : - COG functional category : - COG ID : - EC number : - Position : 8022872 - 8024104 bp Length : 1233 bp Strand : + Note : PFAM: Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: phe:Phep_3394 major facilitator superfamily protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Major faci DNA sequence : ATGAAACCTGTTCGGTCTGCTGCTATACAATTCATTTTTATTACAGTACTTATTGATGTTATTGGTTGGGGATTAATAAT ACCGGTAATGCCGAAATTAATCTCCGGATTAAAACATGTATCTGTAAACGAAGCAAGTAAATATGGCAGTTGGCTGATAG GTGTGTATGCGTTGATGCAATTTATTTGCGGGCCTATCCTTGGCAGCATCAGTGATAAATACGGTCGCCGGCCTGTGTTG TTGTTTTCATTATTTGGTTTTGGCATCGATTATTTATTTATGGCCATGGCGCCCAACTATGGCTGGTTATTCCTGGGCCG GGTAGTGTCCGGCATCACTGGTGCAAGTTTTAGTACCGCCTACGCCTATATAGCAGACATCAGTACCAACGAAAACCGGG CAAAGAATTTCGGTATGGTAGGCGCAGCCTTTGGACTGGGTTTTATTATTGGCCCCGCCATTGGCGGACCGTTGAGTAAA CTGGGCGTCCGAGCGCCCTTTTATGCCGCAGCTATTTTATGTTTGCTGAACTGGTTATATGGCTATTTTATTTTACCTGA GTCGCTCGATAAAGAACACCGGCGTGCATTTGACTGGCGCCGCGCCAACCCCTTTGGCTCCCTGATGCAATTGAAAAAAT ATCCTGCTATCGGTGGATTGGTGATCTCCCTTACAACAGTATATTTAGCGGCCCACGCTGTACAAAGTAACTGGAGCTAT TTTACTGCGTATCGCTTTCAGTGGAGCGCCACCACAATCGGTTATTCATTAGCCCTTGTTGGGGTACTGGTAGCATTGGT ACAAACGGTTGTAATGCGTAAACTGAATCCGGTATTAGGCAACGAGCGTAGCATTTATATCGGATTATTATTGTATTCAC TGGGCATGTTCCTGTTTGCATTTGCTACCCAAAGCTGGATGATGTTTGCCTTTTTAGTGCCTTATTGTTTAGGTGGAATA GCCGGGCCGGCATTGCAATCTACCATTGCCGGTCATGTGCCGGCCAATGCACAGGGCGAGTTACAGGGCATACTGGGCGG CCTGCAAAGTGTTACTTCTTTTTTCGGTCCGTTAATAATGAACAATCTTTTTAATTATTTTACAGGAGAATCGGCGCCCT TCCATTTTCCGGGGTCATCATTTTTCCTGGGGGCTTTGTTGATGTTAGTAAGCGCTGTACTTGCCTATCGCTTTTTATAT AAAGAAAAACATATAATACCTGCATCCTCATGA Protein sequence : MKPVRSAAIQFIFITVLIDVIGWGLIIPVMPKLISGLKHVSVNEASKYGSWLIGVYALMQFICGPILGSISDKYGRRPVL LFSLFGFGIDYLFMAMAPNYGWLFLGRVVSGITGASFSTAYAYIADISTNENRAKNFGMVGAAFGLGFIIGPAIGGPLSK LGVRAPFYAAAILCLLNWLYGYFILPESLDKEHRRAFDWRRANPFGSLMQLKKYPAIGGLVISLTTVYLAAHAVQSNWSY FTAYRFQWSATTIGYSLALVGVLVALVQTVVMRKLNPVLGNERSIYIGLLLYSLGMFLFAFATQSWMMFAFLVPYCLGGI AGPALQSTIAGHVPANAQGELQGILGGLQSVTSFFGPLIMNNLFNYFTGESAPFHFPGSSFFLGALLMLVSAVLAYRFLY KEKHIIPASS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tetA(A) | AGK07027.1 | TetA(A) | Not tested | SGI1 | Protein | 1e-47 | 43 |
| tetA(A) | AGK07085.1 | TetA(A) | Not tested | SGI1 | Protein | 1e-47 | 43 |
| tetA | YP_006098396.1 | tetracycline resistance protein | Not tested | Tn2411 | Protein | 2e-47 | 43 |
| tetA(A) | ACK44537.1 | TetA(A) | Not tested | SGI1 | Protein | 1e-47 | 43 |
| tetA(A) | ACN81011.1 | TetA(A) | Not tested | AbaR5 | Protein | 4e-47 | 43 |
| tetA | CAJ77066.1 | Tetracycline resistance protein | Not tested | AbaR1 | Protein | 3e-47 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Niako_6509 | YP_005012136.1 | major facilitator superfamily protein | Y19114.gene.p01 | Protein | 3e-46 | 43 |
| Niako_6509 | YP_005012136.1 | major facilitator superfamily protein | AY264780.2.gene3.p01 | Protein | 2e-52 | 43 |
| Niako_6509 | YP_005012136.1 | major facilitator superfamily protein | NC_011586.7045189.p0 | Protein | 2e-44 | 43 |
| Niako_6509 | YP_005012136.1 | major facilitator superfamily protein | CP001485.1.gene2821. | Protein | 2e-47 | 43 |
| Niako_6509 | YP_005012136.1 | major facilitator superfamily protein | AF534183.gene.p01 | Protein | 2e-47 | 43 |
| Niako_6509 | YP_005012136.1 | major facilitator superfamily protein | NC_010410.6002597.p0 | Protein | 2e-47 | 43 |
| Niako_6509 | YP_005012136.1 | major facilitator superfamily protein | X75761.gene.p01 | Protein | 2e-46 | 42 |
| Niako_6509 | YP_005012136.1 | major facilitator superfamily protein | AF090987.gene.p01 | Protein | 2e-36 | 42 |
| Niako_6509 | YP_005012136.1 | major facilitator superfamily protein | AF133139.gene.p01 | Protein | 9e-42 | 41 |
