Gene Information

Name : Niako_6128 (Niako_6128)
Accession : YP_005011756.1
Strain : Niastella koreensis GR20-10
Genome accession: NC_016609
Putative virulence/resistance : Unknown
Product : integrase family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7611255 - 7612466 bp
Length : 1212 bp
Strand : +
Note : PFAM: Phage integrase family; InterPro IPR002104; KEGG: rso:RSc0968 cp4-like integrase protein; PFAM: Integrase, catalytic core, phage; SPTR: Integrase family protein

DNA sequence :
ATGTCACTTTCTGACATGCAATGTCGTGCTGCCAAACCTCAAACCAAACCATACAAATTATTCGATAGTGATGGGCTTTA
CCTGGAAGTTCTGCCTTCCGGTGTAAAGTCCTGGCGCTTGAAATATAGTATTCATGAAAAAGAAAAGCGCATGGCACTTG
GTATTTATCCAAACGTACCATTGATCGAAGCGCGACAAAAGAAAACAGAAGCAAAGGCACTTGTGGAGCAGGGCCTTGAT
CCCATTCTTGTGAGAATAGAACAAAAGCAAATTGCAGCCTTAGCGCAAGCCGACACATTCGAGAAAATGGCCCTGGAATG
GTATGAAAAGCAAATAGATAACTGGAAGTCATCATATGCGGAAAAAATGAAGCACTATTTGGAAAGATATATCTTTCACA
AAATCGGGGGTTTCCCTTTGCATGCCATCAAGCCGCTCATGATGTTGAATTGTCTACAAGAGATTGAGAAAACTAATCCT
GACATGTCACGACGTTTAAAAGGAGCCTGTAGTCAAATTTTCAAATATGCCATTGCCACCGGACGAGGAGAGAATGATCC
AACTTACGGCCTGGAAGTCGCTTTTAAAAAATTCAAAAAAGGTCATTATGCATCCATCACAGTTGACGAATTTCCTGATT
TTATCGTCAAGTTGTACGATTACCGGGATCGCATTAACCGAAAAACCTTCCTTGCTTTACGCTTAATGCTTTTGACATTC
GTGCGCACACAAGAGCTAATCCACGCTAAAAAGACTGAATTTGACCTTATAAACAAAAAATGGGTAATTCCTGGCGAACG
AATGAAAAGGGGCCTACCGCATATAGTTCCGCTATCACGACAGGCAGTGGAGATTGTAAAGGAGCTAATAACACTTAGTG
GTTACAGGGAATATTTGCTACCTGGTTACTTTAAGCCTCGTGAACCCATGTGCAACCACACTTTACTCATGGCAATCAAA
CGGATGGGATATAAAGGCCGTATGACCGGGCATGGGTTCCGTTCACTGGCTTTGGGTATTTTAAAAGAAAAATTGCATTA
CTCACATGATGTGGCTGATCGGCAATTAGCACACGTTCCTAAAAGCAGTGTAGACCGGGCTTATGACCGGGCACAATTCC
TGCCACAGCGTATTGAAATGATGCAGAATTATGCTGATTATATTGATAAGACTTACCTGGAAGAATTGGCAAGACAAATG
AGCAAAACCTAA

Protein sequence :
MSLSDMQCRAAKPQTKPYKLFDSDGLYLEVLPSGVKSWRLKYSIHEKEKRMALGIYPNVPLIEARQKKTEAKALVEQGLD
PILVRIEQKQIAALAQADTFEKMALEWYEKQIDNWKSSYAEKMKHYLERYIFHKIGGFPLHAIKPLMMLNCLQEIEKTNP
DMSRRLKGACSQIFKYAIATGRGENDPTYGLEVAFKKFKKGHYASITVDEFPDFIVKLYDYRDRINRKTFLALRLMLLTF
VRTQELIHAKKTEFDLINKKWVIPGERMKRGLPHIVPLSRQAVEIVKELITLSGYREYLLPGYFKPREPMCNHTLLMAIK
RMGYKGRMTGHGFRSLALGILKEKLHYSHDVADRQLAHVPKSSVDRAYDRAQFLPQRIEMMQNYADYIDKTYLEELARQM
SKT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 3e-66 41