Gene Information

Name : Niako_5789 (Niako_5789)
Accession : YP_005011423.1
Strain : Niastella koreensis GR20-10
Genome accession: NC_016609
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7212350 - 7212799 bp
Length : 450 bp
Strand : -
Note : PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR000424:IPR011344; KEGG: cpi:Cpin_0936 single-strand binding protein; PFAM: Primosome PriB/single

DNA sequence :
ATGAGAGGAGTAAACAGGGTAATGCTAATTGGTAATTTAGGAAAGGACCCGGATACACAGCACCTTGAGGGACATATTGC
CGTAGCAAAATTTCCTTTGGCGACCACCGAAACATTTAAAGACAGATCGGGCAAGCTCATTTCTCAAACAGAATGGCATA
CCGTGGTACTTTGGAGAGGACTGGCAGAACTGGCGCAAAAGTACCTGCACAAGGGCAGCCTGGTATACATAGAGGGCAGA
CTCCGCACTCGTAGCTGGGAAGATAAGGAAGGCAACAAAAAATTTGCAACCGAAGTCGTAGGCGACAACCTGATCATGCT
GGATAAAAGGGCCGATGCCACGCATGGCTCACATGGCACTACCACGCCTCATAGCGACAATGTAGAGGGATTTAACAGTG
CCGATATACCACCCATAGGTGATACCCCATCCCAGGATTTGCCATTCTAA

Protein sequence :
MRGVNRVMLIGNLGKDPDTQHLEGHIAVAKFPLATTETFKDRSGKLISQTEWHTVVLWRGLAELAQKYLHKGSLVYIEGR
LRTRSWEDKEGNKKFATEVVGDNLIMLDKRADATHGSHGTTTPHSDNVEGFNSADIPPIGDTPSQDLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 5e-21 44