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Name : Niako_5752 (Niako_5752) Accession : YP_005011386.1 Strain : Niastella koreensis GR20-10 Genome accession: NC_016609 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 7172511 - 7173782 bp Length : 1272 bp Strand : + Note : PFAM: tRNA synthetase class II core domain (G, H, P, S and T); Seryl-tRNA synthetase N-terminal domain; TIGRFAM: seryl-tRNA synthetase; COGs: COG0172 Seryl-tRNA synthetase; InterPro IPR015866:IPR002314:IPR002317; KEGG: cpi:Cpin_0216 seryl-tRNA synthetase; DNA sequence : ATGTTACAGATCGCATTTATTCGACAAAACACGGCGCTGGTAAAGGAACGACTGGCTATAAAGAATTTCAAGGACCTTGA TCTGGTAGATGAGATCATATCCCTGGACGATAACCGGAAAAAATTGCAGCTTGAATTTGATACTACCCAGTCAAAGGTAA ATGCAGCATCCAAAGAGATCGGGCAATTAATGGCAAAGGGACAAAAAGAAACCGCTGACACCTATAAACAGGAAGTGGCT GCTTTAAAATCAACCTTGCAACCCATAGCCGATCAGTTGGCAGAAACAGAGAAAAAGTTGCAGGACCAGATTGTAAAACT GCCCAACCTGCCCTCTGAAAAAGTACCACCCGGCAAAACACCTGAAGATAATATTACCATCAGGGAAGGCGGCCAAAAGC CAACCCTGCATGCTGGTGCTGTTCCGCATTGGGACCTCACAAAAAAATATAACCTCATAGATTTTGAGCTGGGCAATAAA ATTACCGGTAGTGGTTTCCCTGTATATATTGGCAAAGGCGCCAAATTGCAACGGGCGCTCATTGCGTATTTTTTAGACTA TAATACCAATGCCGGTTATAAAGAATTTATGCCGCCGCATATGGTAAATGAAGCATCTGCTTTTGGTACCGGTCAGTTGC CCGATAAAGAAGGACAGATGTATTTTGTTACCGAAGACAATTTTTACCTGATACCTACAGCCGAAGTACCGGTTACCAAT ATTTACCGCGACGAATTATTAAAGGAAACCGATCTGCCTGTTAAGATGACAGCCTACACGCCCTGTTTCCGCCGCGAAGC TGGTAGTTATGGTAAAGATGTACGTGGTTTGAACCGCCTGCACCAGTTCGATAAAGTAGAAGTTGTACAGATCGTTCACC CCGATAAAAGCTACGATGTACTGGAAGAAATGGTAGCCCATGTTGAAACATTGCTGCAATCGCTCAACCTGCCCTATCGT ATTCTGAAATTGTGCGGTGGCGATATGGGGTTTGCATCTGCCCTTACCTACGATTTTGAAGTTTACAGCGCCGCACAGCA AAGATGGCTGGAGGTTAGTTCTGTATCGAATTTTGAGGCTTACCAAACCAACCGGATGAAAATACGGTTTAAAGATGCCA ATGGTAAAAATCAACTGGTGCACTCATTAAACGGCAGTTCTCTGGCACTACCAAGAATAGTTGCCTGCTTACTGGAAAAC CATCAAACCGAAACTGGTATTCAGTTACCGGCTGTACTGCACAGTTATTTCGGCGCATCAGTGATCAACTGA Protein sequence : MLQIAFIRQNTALVKERLAIKNFKDLDLVDEIISLDDNRKKLQLEFDTTQSKVNAASKEIGQLMAKGQKETADTYKQEVA ALKSTLQPIADQLAETEKKLQDQIVKLPNLPSEKVPPGKTPEDNITIREGGQKPTLHAGAVPHWDLTKKYNLIDFELGNK ITGSGFPVYIGKGAKLQRALIAYFLDYNTNAGYKEFMPPHMVNEASAFGTGQLPDKEGQMYFVTEDNFYLIPTAEVPVTN IYRDELLKETDLPVKMTAYTPCFRREAGSYGKDVRGLNRLHQFDKVEVVQIVHPDKSYDVLEEMVAHVETLLQSLNLPYR ILKLCGGDMGFASALTYDFEVYSAAQQRWLEVSSVSNFEAYQTNRMKIRFKDANGKNQLVHSLNGSSLALPRIVACLLEN HQTETGIQLPAVLHSYFGASVIN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-77 | 43 |
