Gene Information

Name : Niako_5476 (Niako_5476)
Accession : YP_005011114.1
Strain : Niastella koreensis GR20-10
Genome accession: NC_016609
Putative virulence/resistance : Resistance
Product : phosphonate-transporting ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6820166 - 6820867 bp
Length : 702 bp
Strand : +
Note : PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: cpi:Cpin_6888 macrolide ABC transporter ATP-binding proten; PFAM: ABC transporter-like; PRIAM: Phosphonate-transport

DNA sequence :
ATGAGTTCGATCATTCATCTGGAAGGTATTCGCAAAAGCTACTTCATGGGTAAACAGGAACTACAGGTGCTGAAGGGCAT
TAACCTGGATATCCATAAAAATGAATATGTAGCCCTGATGGGGCCCTCCGGTTCCGGCAAAAGTACCCTGATGAATATTC
TTGGCTGCCTGGACTCCCCTACTGCCGGCCAGTATGTACTGAATGGTCAGGACGTAAGCAAAATGGCCGATGATAACCTG
GCCGATGTGCGTAATAAAGAAATTGGCTTTGTGTTTCAGCAGTTCAACCTGTTGCCCCGCCTTACAGCTTTGGAAAACGT
AGCCTTACCACTGGTATATGCCGGTGTTGGCCGTAAGGAACGTACAGAAATGGCCATGGAAGTAATAAAAAAAGTGGGTC
TGGAAGATAGAAGCCATCACAAACCCAATGAACTATCGGGTGGTCAATGTCAGCGTGTAGCCATTGCCCGGGCGCTGGTG
AATAATCCTTCGCTCATTCTGGCCGATGAACCTACCGGCAACCTGGATACCAAGACGTCTATAGAGATCATGCAGATCTT
TGGCCAGATACAGGCGGCGGGCAATACCGTTGTACTGGTTACACACGAGGAAGATATTGCGAATCATGCACACCGGATTG
TGCGGTTGCGCGATGGATTGATTGAGAGTGATAAAAGGCGGGTGGCTGAGTTGGTTGGTTGA

Protein sequence :
MSSIIHLEGIRKSYFMGKQELQVLKGINLDIHKNEYVALMGPSGSGKSTLMNILGCLDSPTAGQYVLNGQDVSKMADDNL
ADVRNKEIGFVFQQFNLLPRLTALENVALPLVYAGVGRKERTEMAMEVIKKVGLEDRSHHKPNELSGGQCQRVAIARALV
NNPSLILADEPTGNLDTKTSIEIMQIFGQIQAAGNTVVLVTHEEDIANHAHRIVRLRDGLIESDKRRVAELVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-36 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-36 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-36 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Niako_5476 YP_005011114.1 phosphonate-transporting ATPase NC_012469.1.7686878. Protein 2e-63 59
Niako_5476 YP_005011114.1 phosphonate-transporting ATPase NC_008702.1.4606598. Protein 1e-49 50
Niako_5476 YP_005011114.1 phosphonate-transporting ATPase CP001581.1.gene798.p Protein 4e-39 44
Niako_5476 YP_005011114.1 phosphonate-transporting ATPase CP001581.1.gene598.p Protein 1e-40 42