Gene Information

Name : Niako_5399 (Niako_5399)
Accession : YP_005011039.1
Strain : Niastella koreensis GR20-10
Genome accession: NC_016609
Putative virulence/resistance : Unknown
Product : SOS response UmuD protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6736475 - 6736858 bp
Length : 384 bp
Strand : +
Note : PFAM: Peptidase S24-like; COGs: COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidase); InterPro IPR019759; KEGG: chu:CHU_3076 SOS mutagenesis protein UmuD; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: SOS response UmuD pr

DNA sequence :
ATGGGCTTCCCGTCTCCGGCAAAAGATTACCAGGAGGATGTGATAGAATTATCTCAATACCTGGTTCAGCACCCTACTGC
TACTTTTTATTTCCGGGTTTCCGGCGATAGCATGATCAATGCCTGTATGCCACATGGTTCCCTGCTGGTGGTTGACCGGT
CGCTGAAACCCGCTAGCGGCATGATAGTGCTGGCGGTGGTAAATGGCGAATTCACCGTGCGCCGCATAGTTCAAACCCGT
AAATCGCTGGTGCTGCACCCCGAAAACCCTATTTATAAACCATTGGTAGTCACCGAAGAAATGAACATGCAGGTGTGGGG
GGTGGTAACTGCCGTGGTAGTGAAGTATAAATATGAAAATAATGATCGCGTTGGTGGACTGTAA

Protein sequence :
MGFPSPAKDYQEDVIELSQYLVQHPTATFYFRVSGDSMINACMPHGSLLVVDRSLKPASGMIVLAVVNGEFTVRRIVQTR
KSLVLHPENPIYKPLVVTEEMNMQVWGVVTAVVVKYKYENNDRVGGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13390.1 hypothetical protein Not tested PAGI-5 Protein 3e-16 47
t06650 YP_006892470.1 hypothetical protein Not tested SPI-7 Protein 5e-15 46