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Name : Niako_5359 (Niako_5359) Accession : YP_005010999.1 Strain : Niastella koreensis GR20-10 Genome accession: NC_016609 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 6677844 - 6679142 bp Length : 1299 bp Strand : - Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; COGs: COG0677 DNA sequence : ATGGAAGCGACAAAGCAGTATCACTTAACGGTAATCGGTTTAGGATATGTAGGATTACCCCTGGCAGTAGAATTTGCAAA AAAATATCCTGTTGTAGGTTTTGATATCAATAAAGCAAGGATAGCCGAACTGCGGTCTGGTAACGATCACACGCTGGAGA TCAGCAGCGATCATCTCTCCTCAGTACTTAAAAAACAAGTGGATGGTGCAAACGGTTTGTGGGTGAGCGATCAACTGGAA GACATTAAAACCGCCAACGTGTTTATCATCACGGTGCCTACACCGGTTGATAAATATAACCGCCCCGATCTTACCCCGCT GGTAAAAGCCAGTGAAACGGTAGGTAAAATATTGAAGAAAGGCGATATCGTAGTGTATGAGTCTACCGTATATCCCGGTG TAACCGAAGAAGAGTGCGTGCCTATTCTGGAAAAAGTTTCAGGACTTACTTTCAATAAAGATTTTTATGCCGGTTATTCT CCCGAGCGTATTAACCCCGGCGATAAAGAACATACGGTTACAAAAATTAAAAAAGTAACCTCCGGTTCAACCCCCGAAGC TGCGAAAATTGTAAATGATATCTACAGCAGCATTATTGTAGCGGGCACTCACCTGGCGCCTTCTATAAAAGTGGCCGAAG CAGCCAAGGTTATTGAGAATGCACAACGCGATATCAACATCGCCTTCATCAACGAGCTGGCCAAAATATTTAACCTGCTC GATATCGATACCCAGGAAGTGCTGGCGGCAGCCTCTACCAAATGGAACTTTTTACCCTTTCGCCCGGGTTTGGTTGGCGG TCACTGTATAGGTGTTGACCCATACTATCTGGCGCAAAAAGCGATGGAAGTAGGTTACCATCCTGAGATCATCCTGGCCG GACGCAGACTGAACGATGGCATGGGCGGGTATGTAGCCGGTGAAGTGGTAAAACTGATGGTGAAGAAAGGCATTCCGGTT GCAGGCAGCAAAGCCCTGGTGTTAGGCATCACCTTTAAAGAGAATTGTCCCGATGTTCGCAACACCAAGGTAATTGATAT TATCAGCCATCTGAAAAGCTATAATGTAAGTGTTGATGTGTATGATCCCTGGGCAAATCCTGAAGAAGTATTGCATGAGT ATGGGGTGAAAACGGTTCAGGAATTACCTGCCACCCAATCACAATACAATGCAGTAATACTGGCAGTAGCGCATAAAGAA TTCGGTTATGAAACCATCAAGAAGTTATGCAGCGATAAATGCGTGTTGTTTGATGTGAAAGCCCATTTAGGAAAAGATTT AGTTGATGCACGTTTATAA Protein sequence : MEATKQYHLTVIGLGYVGLPLAVEFAKKYPVVGFDINKARIAELRSGNDHTLEISSDHLSSVLKKQVDGANGLWVSDQLE DIKTANVFIITVPTPVDKYNRPDLTPLVKASETVGKILKKGDIVVYESTVYPGVTEEECVPILEKVSGLTFNKDFYAGYS PERINPGDKEHTVTKIKKVTSGSTPEAAKIVNDIYSSIIVAGTHLAPSIKVAEAAKVIENAQRDINIAFINELAKIFNLL DIDTQEVLAAASTKWNFLPFRPGLVGGHCIGVDPYYLAQKAMEVGYHPEIILAGRRLNDGMGGYVAGEVVKLMVKKGIPV AGSKALVLGITFKENCPDVRNTKVIDIISHLKSYNVSVDVYDPWANPEEVLHEYGVKTVQELPATQSQYNAVILAVAHKE FGYETIKKLCSDKCVLFDVKAHLGKDLVDARL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-122 | 61 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-122 | 61 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 5e-105 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Niako_5359 | YP_005010999.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 7e-123 | 61 |
