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Name : Niako_5358 (Niako_5358) Accession : YP_005010998.1 Strain : Niastella koreensis GR20-10 Genome accession: NC_016609 Putative virulence/resistance : Virulence Product : UDP-glucose 4-epimerase Function : - COG functional category : - COG ID : - EC number : - Position : 6676832 - 6677833 bp Length : 1002 bp Strand : - Note : PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: hmg:100202205 similar to UDP-glucuronate decarboxylase 1; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: UDP-glucose 4-epi DNA sequence : ATGTACACTCAGAAATACCATACCACCGATATTAACAAGGCCACCTTCCTGGTAACAGGTGGCGCCGGTTTCATAGGTTC AAACATTGTGGAATATTTATTAGCGCATGGCGTTGGTAAAGTGCGGGTGCTCGACAACTTTAGTACGGGTTCAATGGAAA ACATTGAACCTTTTTTAGCCCGTCCGGAATTTAGTTTGATAGAAGGCGATATCCGCGACCTGGATACCTGCCGCCGGGCA GTAGATGGTGTTGATTATGTATTGCACCAGGCAGCGTTGGGTTCAGTACCCCGCTCCATCAACGATCCCATTACCAGTAA CGAAGTGAACGTAAGTGGTTTTTTGAATATGCTGGTAGCCGCAAGGGATGCAGGTGTTAAAAGAATGGTATATGCAGCCA GCTCGAGCACCTATGGCGATCACCCTGGTTTGCCAAAAGTAGAAGATAAAATAGGAAACCCGCTGTCGCCCTACGCCGTT ACAAAATATGTAAATGAGCTGTATGCATCGGTATTCAGCCGCACCTACGATTTTCATACCATTGGGTTGCGTTACTTCAA CGTATTTGGTCCCCGCCAAAACCCACGTGGCCCATACGCAGCCGTTATTCCTTTGTTTGTTCAAAGTGCGTTGAAGAACG AAGCGCCTTACATTAACGGCGACGGCGAAACAAGCCGTGACTTCACCTTTGTGGAAAATGCGGTACAGGCAAATATCAAA GCCGCCCTGGCGCCCGATATCAACAAACATGAAGTGGTGAACATAGCCGTAGGTGATAAAACCACCCTGAACGAATTGTG GAAACACATCACCGCGTTCATCGGCATTGACCTGGCGCCTAAATATCGTGAAGAGCGCAAAGGGGATGTTCGTCACAGTT TGGCCGATGTAAGTAAAGCCCATCAGCTGATAGGTTACCAGCCGGTTGTAACCATTCAAACAGGATTGCAAACAACGGTA GAGTGGTATAAGCAATCGTCGTACATGAAAGTTACCTCCTGA Protein sequence : MYTQKYHTTDINKATFLVTGGAGFIGSNIVEYLLAHGVGKVRVLDNFSTGSMENIEPFLARPEFSLIEGDIRDLDTCRRA VDGVDYVLHQAALGSVPRSINDPITSNEVNVSGFLNMLVAARDAGVKRMVYAASSSTYGDHPGLPKVEDKIGNPLSPYAV TKYVNELYASVFSRTYDFHTIGLRYFNVFGPRQNPRGPYAAVIPLFVQSALKNEAPYINGDGETSRDFTFVENAVQANIK AALAPDINKHEVVNIAVGDKTTLNELWKHITAFIGIDLAPKYREERKGDVRHSLADVSKAHQLIGYQPVVTIQTGLQTTV EWYKQSSYMKVTS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviC | NP_458739.1 | Vi polysaccharide biosynthesis protein, epimerase | Virulence | SPI-7 | Protein | 3e-76 | 54 |
| tviC | NP_807944.1 | VI polysaccharide biosynthesis epimerase | Virulence | SPI-7 | Protein | 3e-76 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Niako_5358 | YP_005010998.1 | UDP-glucose 4-epimerase | VFG0430 | Protein | 1e-76 | 54 |
