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Name : Niako_5338 (Niako_5338) Accession : YP_005010978.1 Strain : Niastella koreensis GR20-10 Genome accession: NC_016609 Putative virulence/resistance : Virulence Product : sugar transferase Function : - COG functional category : - COG ID : - EC number : - Position : 6653748 - 6654356 bp Length : 609 bp Strand : - Note : PFAM: Bacterial sugar transferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: ran:Riean_0747 sugar transferase; PFAM: Bacterial sugar transferase; SPTR: Sugar transferase DNA sequence : ATGCAATTGTATCGTAATTTTTTAAAGAGAGTCTTTGACTTTATAGTAAGCCTGATAGCATTCGGTTTACTGTTGCCGCT GTTTATTCTTGTTACAGCATTACTTTATTTAGCCAACCAGGGCAGTCCGTTTTTTGTACAACCCAGGCCCGGTAAAAATG GCCGCATCTTTAAACTGGTGAAGTTTAAAACCATGAACGATAAAAAGGATGCTGCAGGCAACCTGTTATCGGATGCGGAA CGTTTAACGGCTATTGGCGGGTTCATCAGGAAAACATCGCTTGATGAGATCCCACAACTGATCAACGTCATTAAAGGCGA AATGAGTTTGATAGGTCCCCGGCCCCTGCTGGTGGAATACCTGCCTTTGTACAATGACATGCAAAGGAGACGACATGAAG TGCGCCCCGGTATCACTGGCTGGGCGCAGGTGAATGGTCGTAATGCTATAGGCTGGCAGCGGAAGTTTGAACTGGATGTT TGGTATGTTGATCATGTATCATTCACGCTTGACTGTAAGATTGCCTTTTTTACTATTATGAAGGTTGTTAAAAGTGAAGG CGTTAGTCAAACAGGTCATGTAACTATGACAAAGTTCCAGGGAAACTAA Protein sequence : MQLYRNFLKRVFDFIVSLIAFGLLLPLFILVTALLYLANQGSPFFVQPRPGKNGRIFKLVKFKTMNDKKDAAGNLLSDAE RLTAIGGFIRKTSLDEIPQLINVIKGEMSLIGPRPLLVEYLPLYNDMQRRRHEVRPGITGWAQVNGRNAIGWQRKFELDV WYVDHVSFTLDCKIAFFTIMKVVKSEGVSQTGHVTMTKFQGN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1N | AAL26667.1 | type 8 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-28 | 43 |
| SSP0070 | YP_300160.1 | capsular polysaccharide synthesis protein | Not tested | SCC15305cap | Protein | 6e-28 | 43 |
