Gene Information

Name : Niako_5107 (Niako_5107)
Accession : YP_005010749.1
Strain : Niastella koreensis GR20-10
Genome accession: NC_016609
Putative virulence/resistance : Unknown
Product : 3-oxoacid CoA-transferase subunit A
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6335773 - 6336471 bp
Length : 699 bp
Strand : -
Note : PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; COGs: COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase alpha subunit; InterPro IPR012792:IPR004165; KEGG: cpi:Cpin_6963 3-oxoacid CoA-transferase, A subunit; PFAM: Coenzyme A

DNA sequence :
ATGCAAAAAGTTGTTGTCAATGCGGATGCCGCCATTGCCGACATTCAGGATAATGCTACCATTATGCTGGGTGGATTTGG
TTTATGCGGTATTCCTGAAAATTGTATTGCTGCGCTTGTACGCAAAGGCGTTACAAATCTTACCTGTATCTCCAATAATG
CCGGGGTAGATGATTTTGGATTAGGCTTACTGCTAAAGACCCGCCAGATAAAAAAAATGATGAGTTCGTATGTGGGCGAG
AACGCTGAGTTTGAACGGCAGTTGTTAAGCGGTGAGCTGGAAGTGGACCTTATACCCCAGGGCACACTGGCTACCCGTAT
TCAAATGGCCGGTATGGGCATTCCTGCATTTTATACACCAGCCGGATATGGCACCGAAATAGCAACGGGGAAGGAAGTGC
GCGAATTCAATAATAAAATGTATTTGATGGAATACGCGCTGCACGCCGATTTCTCACTTGTGAAGGCCTGGAAGGGCGAT
CGCTATGGCAACCTGGTTTTTCGCAAAACCACCCGCAATTTCTCCACCTCTATTGCCAAAGCAGGTAACATTACCATTGC
AGAAGTAGAACACCTGGTTGAACCTGGTGAACTGGATCCTGATCATATTCACGTGGCAGGCATTTATGTACACCGCATCT
TTGAAGGAACCAATTACGAGAAGCGGATTGAGCGGAAGACAGTGAAGATGGAGAAATGA

Protein sequence :
MQKVVVNADAAIADIQDNATIMLGGFGLCGIPENCIAALVRKGVTNLTCISNNAGVDDFGLGLLLKTRQIKKMMSSYVGE
NAEFERQLLSGELEVDLIPQGTLATRIQMAGMGIPAFYTPAGYGTEIATGKEVREFNNKMYLMEYALHADFSLVKAWKGD
RYGNLVFRKTTRNFSTSIAKAGNITIAEVEHLVEPGELDPDHIHVAGIYVHRIFEGTNYEKRIERKTVKMEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18070.1 unknown Not tested TTSS locus Protein 3e-31 43