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Name : Niako_4521 (Niako_4521) Accession : YP_005010182.1 Strain : Niastella koreensis GR20-10 Genome accession: NC_016609 Putative virulence/resistance : Unknown Product : Tex-like protein Function : - COG functional category : - COG ID : - EC number : - Position : 5638767 - 5641046 bp Length : 2280 bp Strand : - Note : PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; COGs: COG2183 Transcriptional accessory protein; InterPro IPR006641:IPR018974:IPR003029; KEGG: cpi:Cpin_6302 RNA binding DNA sequence : ATGGAAGTAAAGTACATTCAGAAGATCGCTGAAAAATTATCATTCAGCATTAAGCAGGTCACGAATATTCATGACTTGCA AAGCGAAGGCGCAACCATTCCTTTTATGGCCCGTTACCGTAAGGAAGCGACCAATAACATGGACGAGGTGGGCATTGGAC AGGTGGTTGAACAGATCGCTTATTTTTCTGAACTGGATAAACGCAAAGAAACAGTGGTGAAAACGATCGAAGGCCTGGGC AAATTAACGCCCGAGTTAAAAGATCGTATTGAAAATTGTTACGATGCTACCGAGCTGGAAGATATTTATCTGCCTTACAA ACCCAAACGTAAAACCAGGGCTACCCAGGCTATCGAAAAAGGACTGGAACCTTTGGCGAAACTGGTATTTGAACAGGGCG CTGAAAATATGGATGAAGTGGCTGCCAAATTCATCAACGAGCAGGTAAAAGATATTAAGGAAGCTATGCAGGGCGCCCGC GATATCATTGCAGAGTGGGTGAGTGAAAACGAGCAGGCGCGTAATAAAGTGCGCCAGGAGTTTACCGAAACTGCCAAGCT TTCTTCAAAAGTACTCACCAGCAAAAAAGAGGAAGAAGAAGCCCAGAAATACCGTGATTACTTTGAGTTCAACGAGAACC TGGCCGATAGTCCTTCTCACCGCATCCTGGCCATTCGCCGGGCCGAGAAAGAAGGCTACCTGGTTATGGACATTAACATA GACAAACAAGCGGCTGTTGACGACCTCAACAGAACATTTGTAAAAAACAGCAGCCCGTTTGCCGCTGAAGTAAAGAAAGC GATCGACGATTCGTTCGACCGTTTGCTGAAACCTTCTATCGAGAATGAGTTCCGCCTGGCGAGCAAGAATAAGGCCGACG AAGAAGCTATTAATGTATTTGCCGAGAACCTGCGTCAGTTATTGCTGGCTTCGCCATTGGGTTCCAAAAAAGTGCTGGCG CTTGACCCTGGTTTCCGTACCGGTTGCAAACTTGTTTGTCTGGACGCACAGGGTAACCTGGTGTACAATACCGCCATCTA CCCACACCCGCCACAGAACGACTGGCAGGGTAGTGTATCTGAATTAAAATTCCTGGTTGATAAATATGAAATTGACGCCA TCGGTATTGGTAATGGTACCGCCGGCCGGGAAACTGAACAACTGGTTCGCAGCATCGACTTTGGAAAACCGGTAAGCGTG TTCCAGGTAAATGAAAGCGGCGCGTCTATTTATTCTGCATCAGAAGTTGCCCGTGAAGAGTTTCCCGATCAGGATGTAAC CGTACGTGGTGCGGTTAGTATTGGCCGCCGTTTGCTCGATCCGCTGAGTGAGCTGGTAAAGATCGATCCCAAATCAATTG GGGTAGGCCAGTACCAACACGATGTAAACCAAACCCGCCTCAAAGAAGCGCTGGACAGAGTAGTAGAGAGTGCGGTAAAC TTTGTGGGGGTTGATGTGAACACCGCATCCAAACACCTGCTGGTTTATGTATCGGGTTTAAGCAATACCCTGGCTAAAAA TATTGTTGAATACCGCGCCAAGAACGGGCCTTTCAAAACCCGTGAAGAATTGAAGAAAGTGCCAATGATGGGACCCAAAT CATTTGAGCAGTGTGCCGGTTTCTTGCGTATTCCTGGCGCCGAAAACCCGCTGGATAACTCATCTGTACACCCCGAGAGC TATCACGTGGTGGAAAGTATGGCGAAAGATCTGCAGGCTTCACTGGAAGACCTGATTAAAAAAAGCGAGCTGCGCAAAAA GGTAAACAAGAAACAATACATCACAGAAAGCATTGGTGAATACACCATCGATGATATATTAAAAGAGTTGGAAAAACCTG GTCGTGACCCACGGGCACAGATCGAGGAGTTCCGCTTTGATGAAACCATTAAAGCCATTGAAGATGTAAAACCTGGTATG ACGGTGCCGGGCATTGTTACCAACATCACCAACTTTGGTGTGTTTGTTGACATTGGTGTTAAACAGGATGGCCTGGTGCA TATTTCTCAATTGAGCAATACCTACGTTTCTGATCCTAATGAAGTGGTGAAACTGAACCAGAAAGTAATGGTTACCGTTT CTGAGGTGGATGTGCCGCGCAAGCGTATTTCACTTACCATGAAAGATCAGCAGAAAGGTGGTGGCGGTGAAAGACGCAGC GGTGGCGGTGGTGATCGCAAACCAGCTGCCGGTGGCGGCAAGGCACAACCTAAAAAACAGGAGCCGCTGAATCCGTTCCA GGCCAAGCTGGCGGAGTTGAAGAAGAAGTTTAATGATTAG Protein sequence : MEVKYIQKIAEKLSFSIKQVTNIHDLQSEGATIPFMARYRKEATNNMDEVGIGQVVEQIAYFSELDKRKETVVKTIEGLG KLTPELKDRIENCYDATELEDIYLPYKPKRKTRATQAIEKGLEPLAKLVFEQGAENMDEVAAKFINEQVKDIKEAMQGAR DIIAEWVSENEQARNKVRQEFTETAKLSSKVLTSKKEEEEAQKYRDYFEFNENLADSPSHRILAIRRAEKEGYLVMDINI DKQAAVDDLNRTFVKNSSPFAAEVKKAIDDSFDRLLKPSIENEFRLASKNKADEEAINVFAENLRQLLLASPLGSKKVLA LDPGFRTGCKLVCLDAQGNLVYNTAIYPHPPQNDWQGSVSELKFLVDKYEIDAIGIGNGTAGRETEQLVRSIDFGKPVSV FQVNESGASIYSASEVAREEFPDQDVTVRGAVSIGRRLLDPLSELVKIDPKSIGVGQYQHDVNQTRLKEALDRVVESAVN FVGVDVNTASKHLLVYVSGLSNTLAKNIVEYRAKNGPFKTREELKKVPMMGPKSFEQCAGFLRIPGAENPLDNSSVHPES YHVVESMAKDLQASLEDLIKKSELRKKVNKKQYITESIGEYTIDDILKELEKPGRDPRAQIEEFRFDETIKAIEDVKPGM TVPGIVTNITNFGVFVDIGVKQDGLVHISQLSNTYVSDPNEVVKLNQKVMVTVSEVDVPRKRISLTMKDQQKGGGGERRS GGGGDRKPAAGGGKAQPKKQEPLNPFQAKLAELKKKFND |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 3e-141 | 46 |
