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Name : Niako_4291 (Niako_4291) Accession : YP_005009962.1 Strain : Niastella koreensis GR20-10 Genome accession: NC_016609 Putative virulence/resistance : Unknown Product : 3-oxoacyl-(acyl-carrier-protein) reductase Function : - COG functional category : - COG ID : - EC number : - Position : 5384783 - 5385550 bp Length : 768 bp Strand : + Note : PFAM: short chain dehydrogenase; COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002198; KEGG: sli:Slin_2110 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl DNA sequence : ATGGCTGTCTTTACTGACCTTTGTTCGATGGAAAACGAGATAAAAGATAAAGTAGTCGTTATTACAGGCGCCAGCAGCGG CATCGGTGAAACTACTGCGATCACCCTGGCAGCGCAGGGCGCTAAAGTGGTACTAGGCGCTCGCCGTAAAGAACGGCTGG AAAGCCTGGTCAACCGGATCAAACAAACAGGCGGCCAAGCTGTTTATTTGGTGACCGACATTAAGAAACGTACCGATCTG ATAAAGTTGGTGGACCTGGCCTGTGAAGTATATAGCCGTGTAGATGTGATGGTTAATAATGCCGGAATAAGTCATCTGTC ACGGATAGACGAGGTGCAGGTAGAAGACTGGGAAGAAATGATCGATGTAAATCTAAAGGGTACCCTGTATGGTATTGCAG CAGCTTTACCTATCTTCAAAAGGCAAGGGTCCGGTCATATCATCAATATCCTGTCGACTTCTGGTATTAAAATTGTGCCG CTTCAGGGGGTATATGCAGGCACCAAAAATGCTGTACGTACGATTGCAGAGGCCCTGCGACAGGAGTCGGGCGGACTGTA CAGGGTAACGGGGATCTCGCCTGGTTTTGTCAATACAGAACTGGCGGAACATATCAAAGATGAGGCAACCAGGGCGGCCA TTAAAGAAAAAGCAGCGACAATTGCGATTACCCCCAATGCCATTGCCAATGCGGTGATATTTGCGATCAGTCAGCCAGCC AATGTAGATATAGGAGATATCGTTATTCGTCCGAGTATACAGGATTAA Protein sequence : MAVFTDLCSMENEIKDKVVVITGASSGIGETTAITLAAQGAKVVLGARRKERLESLVNRIKQTGGQAVYLVTDIKKRTDL IKLVDLACEVYSRVDVMVNNAGISHLSRIDEVQVEDWEEMIDVNLKGTLYGIAAALPIFKRQGSGHIINILSTSGIKIVP LQGVYAGTKNAVRTIAEALRQESGGLYRVTGISPGFVNTELAEHIKDEATRAAIKEKAATIAITPNAIANAVIFAISQPA NVDIGDIVIRPSIQD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAC20627.1 | hypothetical protein | Not tested | Internalin | Protein | 1e-39 | 47 |
| adh | CAI59964.1 | short-chain dehydrogenase | Not tested | LIPI-2 | Protein | 5e-42 | 45 |
