Gene Information

Name : Niako_4131 (Niako_4131)
Accession : YP_005009810.1
Strain : Niastella koreensis GR20-10
Genome accession: NC_016609
Putative virulence/resistance : Unknown
Product : Potassium-transporting ATPase subunit B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5192119 - 5194209 bp
Length : 2091 bp
Strand : -
Note : PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; COGs: COG2216 High-affinity K+ transport system ATPase chain B; HAMAP: Potassium-transporti

DNA sequence :
ATGTCAAAAAGAAAACGCGAAATAAAATTGTTTGAACCGGCGCTGGTAAACACTGCCATCAAACAATCTTTTATAAAATT
GAGCCCCCGGTTAATGGTGAAGAACCCGGTGATGTTCACTGTGGAAATTGGCACCATTGTGATGCTGGCAGTGGTGATGT
ATCAAATAATTACGCATGATGCTACGCAGGGTGCCCTGTGGTACAATATTGTAGTATTTGCCATTTTGTTCCTTACCGTG
TTGTTTGCCAACTTTGCCGAAGCGCTGGCCGAGGCAAGAGGTAAAGCCCAGGCCGAAAGCCTGCGCAAAACAAGGGAGGA
AACACCCGCTAAAAAAGTAATTTCCCCTGGCGATATTTTCGTAAAAGAAATAAAAGTAGTACCGTCCTCACAACTTCGGT
TAAACGACCGGTTTGTATGCGAAACCGGTGATGTAATACCTATGGATGGGGAGATCATTGAAGGAATTGCCACCATAGAT
GAATCAGCCATAACCGGTGAGTCTGCGCCGGTGATCCGCGAGTCGGGTGGTGATAAATCATCGGTGACCGGTGGTACCAA
AGTGCTTAGCGACCGTATTGTGGTACAGGTAACAACCCAGCCCGGAGAAACGTTCCTGGATAAAATGATCGCGCTGGTAG
AAGGCGCCAGCCGGCAGAAAACACCCAATGAAATTGCATTGACCATTCTGCTCGCCGCCTTTACACTTATTTTCATCATC
GTGTGCGTAACGCTGAAACCATTTGCCGATTACGCCAATACACCTATTACCATTGCCGCATTTATATCCTTGTTTGTGTG
TTTAATCCCCACTACCATTGGTGGATTATTATCCGCCATTGGTATTGCGGGAATGGACCGTGCATTGCGTGCGAATGTGA
TCTCTAAAAGCGGTAAAGCCGTTGAAACCGCGGGTGACGTGGATGTGCTGTTGTTGGATAAAACAGGCACCATCACCATC
GGTAACAGAAAGGCCACTAATTTTTATCCGGCCAGGAATGTAGAAGAGCATGAATTTATTGACCTGGTTGTGTATAGTTC
ATTGGCCGATGATACGCCGGAAGGAAAATCGATCGTTGAACTGGCGGCCAAACAAAGCAGCCCTGATCTTACCCTCGATC
AGTTCCGTCATCAGAAGTTGGCGGTACAGGCAGCGCCCCTCACTTTTATCAAATTCACTGCAGAAACGAGAAGCAGTGGA
GTTGATTTCCCTAATGGAACAAAGATCCGGAAGGGCGCCTTTGACGCAATACGCAACCTGGCCATGAAAGCCGGCAACGG
TATGCCCTTGGAAGTGGAAGACCGGGTAAAGAAGATCTCCGGCGATGGCGGTACCCCGCTTGTGGTATCGGTGGATAATG
TAATAAAAGGCGTGATTGAATTACAGGATATCATCAAACCCGGGATCCAGGAACGGTTTGAACGTTTGCGTAAAATGGGT
GTAAAAACGGTAATGGTTACCGGTGATAATCCGCTTACAGCAAAGTATATTGCCACTAAAGCAGGCGTAGATGATTTTAT
TGCCGAAGCAAAACCGGAAGATAAAATGAACTACATCCGCAAGGAACAGGCAAGCGGTAAACTGGTGGCCATGATGGGTG
ATGGTACAAACGATGCGCCCGCGCTGGCGCAGGCTGATGTGGGCGTAGCCATGAACAGTGGTACCCAGGCGGCAAAAGAA
GCCGGTAACATGGTTGACCTGGATAACGACCCCACTAAATTGATTGAGGTAGTGGAGATTGGTAAACAGTTGCTGATTAC
CCGTGGTACCTTAACCACCTTCTCCATTGCCAATGACGTAGCCAAATATTTCGCTATCGTTCCGGCCCTGTTTATTGCTT
CTATTCCGGCCCTGCAACATTTGAATATAATGGGTTTGAAAAGCCCCGAGTCGGCTATCTTATCAGCCATCATTTTCAAC
GCCATTATTATTCCCATGCTGATTCCCCTGGCATTAAAAGGCGTTGCGTATAAACCAATAGGCGCCAGCGCCCTGTTACG
CAGAAACCTGTTGATCTATGGTGTGGGCGGCGTAGTGGTTCCGTTTATAGGTATCAAGCTGATTGATATGTTGCTGGCAG
TTTTTATGTAA

Protein sequence :
MSKRKREIKLFEPALVNTAIKQSFIKLSPRLMVKNPVMFTVEIGTIVMLAVVMYQIITHDATQGALWYNIVVFAILFLTV
LFANFAEALAEARGKAQAESLRKTREETPAKKVISPGDIFVKEIKVVPSSQLRLNDRFVCETGDVIPMDGEIIEGIATID
ESAITGESAPVIRESGGDKSSVTGGTKVLSDRIVVQVTTQPGETFLDKMIALVEGASRQKTPNEIALTILLAAFTLIFII
VCVTLKPFADYANTPITIAAFISLFVCLIPTTIGGLLSAIGIAGMDRALRANVISKSGKAVETAGDVDVLLLDKTGTITI
GNRKATNFYPARNVEEHEFIDLVVYSSLADDTPEGKSIVELAAKQSSPDLTLDQFRHQKLAVQAAPLTFIKFTAETRSSG
VDFPNGTKIRKGAFDAIRNLAMKAGNGMPLEVEDRVKKISGDGGTPLVVSVDNVIKGVIELQDIIKPGIQERFERLRKMG
VKTVMVTGDNPLTAKYIATKAGVDDFIAEAKPEDKMNYIRKEQASGKLVAMMGDGTNDAPALAQADVGVAMNSGTQAAKE
AGNMVDLDNDPTKLIEVVEIGKQLLITRGTLTTFSIANDVAKYFAIVPALFIASIPALQHLNIMGLKSPESAILSAIIFN
AIIIPMLIPLALKGVAYKPIGASALLRRNLLIYGVGGVVVPFIGIKLIDMLLAVFM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 9e-129 57
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-128 56
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-128 56
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-128 56
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-128 56
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 4e-128 56
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 8e-134 56
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 1e-133 56