Gene Information

Name : Niako_1205 (Niako_1205)
Accession : YP_005006984.1
Strain : Niastella koreensis GR20-10
Genome accession: NC_016609
Putative virulence/resistance : Resistance
Product : phosphonate-transporting ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1471146 - 1471823 bp
Length : 678 bp
Strand : -
Note : PFAM: ABC transporter; TIGRFAM: putative bacteriocin export ABC transporter, lactococcin 972 group; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: rbi:RB2501_00521 putative ABC transport

DNA sequence :
ATGATAAAGATCCGGGATCTCGAAAAAATCTATCGTACCGAAGAGGTTGAAACCGTAGCATTGAACAAAATTTCCATAGA
TGTTAAGGAAGGTGAATTTGTAGCCATTATGGGTCCATCGGGTTGCGGCAAATCAACCCTGCTGAATATCCTGGGTTTGC
TGGACGATCCCGATAACGGCAGCTTTTTGTTCAACAATATTGAAGTGGCGAATTTTAATGAGCGCAAACGCGCCGATTTG
CGCAAACATAATATCGGGTTCGTTTTCCAAAGTTTTAACCTGATTGATGAACTCACCGTATTTGAAAACGTGGAATTGCC
ATTGATCTATACCGGTGTTAAATCGGGCGATCGCAAAAAACGTGTGGAAGAGGTGCTCGATAAAATGCAGATCATGCACC
GCCGCAACCACTATCCCCAGCAATTAAGTGGTGGTCAGCAACAACGTGTAGCGGTGGCCCGTGCCGTAGTAAACAACCCC
AAACTGATATTGGCGGATGAGCCTACAGGTAACCTCGACAGCAGCAATGGTAATGAAGTGATGACCCTGTTAACCGATCT
GAACGAACAGGGCACTACCATCATCATGGTTACCCACAGTGAACACGATGCCCGGTACAGCCATCGTATCATTCGCATGC
TCGACGGACAAACCGTGTTAGAGAACATAATGGTGTAG

Protein sequence :
MIKIRDLEKIYRTEEVETVALNKISIDVKEGEFVAIMGPSGCGKSTLLNILGLLDDPDNGSFLFNNIEVANFNERKRADL
RKHNIGFVFQSFNLIDELTVFENVELPLIYTGVKSGDRKKRVEEVLDKMQIMHRRNHYPQQLSGGQQQRVAVARAVVNNP
KLILADEPTGNLDSSNGNEVMTLLTDLNEQGTTIIMVTHSEHDARYSHRIIRMLDGQTVLENIMV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-26 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 3e-29 41
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Niako_1205 YP_005006984.1 phosphonate-transporting ATPase NC_012469.1.7686878. Protein 1e-48 53
Niako_1205 YP_005006984.1 phosphonate-transporting ATPase CP001581.1.gene798.p Protein 3e-32 46
Niako_1205 YP_005006984.1 phosphonate-transporting ATPase NC_008702.1.4606598. Protein 2e-35 46
Niako_1205 YP_005006984.1 phosphonate-transporting ATPase CP001581.1.gene598.p Protein 3e-29 42
Niako_1205 YP_005006984.1 phosphonate-transporting ATPase NC_012469.1.7686946. Protein 3e-25 42
Niako_1205 YP_005006984.1 phosphonate-transporting ATPase NC_012469.1.7685735. Protein 2e-32 41