Gene Information

Name : arsB (PECL_1894)
Accession : YP_005005800.1
Strain :
Genome accession: NC_016608
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 23488 - 24783 bp
Length : 1296 bp
Strand : +
Note : -

DNA sequence : 
ATGGAAGTATTTTTGGCTATTTCCATTTTTTTGCTTACCTTAATTTTAGTCATTTGGCAACCTCGTGGCCTATCTATTGG
TTGGTCTGCTGCTGGTGGTGCAGTTTTAGCACTGGTTTTTGGCGTAGTTTCTTTTAATGACGTTGGAACGGTAACGGTAA
TTGTATGGAATGCTACACTTTCATTTGTATCCATTATATTGATCTCGTTGATTCTCGATCAAATTGGATTCTTTGAATGG
GCAGCTTTACATATGGCACAATTAGCTCGTGGTAACGGCGTTATGATGTTTATCCTAATTGCTGTTCTAGGTACTGTTGT
AGCAGCTTTATTTGCTAATGATGGTGCTGCGCTTATCCTGACTCCTATTGTTTTATCGATGGTTAGAGCTTTAAAGTTTG
ACGATAAAAAAATCTTTCCATTCATCATTGCTAGTGGGTTTATTGCTGATGCAACTTCATTGCCTTTAGTTGTCAGCAAT
CTTGTGAATATTGTCTCAGCAGATTTCTTCGGTTTTACATTCTCAGAATATGCATTACGCATGTGGATTCCTGATTTATT
TTCACTTGGTATTAGCATTCTAATTCTTTATTTATATTTCCGAAAAGCTATTCCTAAAGAGTTTGATGGCAGTCATCTTG
GCTCACCAAAAGATGCCATTAAAGATTTACGATTATTTTATTTATCTTGGGTAGTTCTAACAGCACTGCTCATTGGCTAC
TTCTTAAGTAGTTTTATCAAGGCACCAGTTTCATTAATAGCTTTACCAATTGCTGCTATATTCCTATTACTTGCTAGAAA
AAGCCCGAAAGTTGATGTATTGGCTACTATTAAGAGCGCTCCATGGAGTATCGTTGCATTTTCAATCGGAATGTACGTAG
TTGTTTATGGTCTACAAAATGCTGGTTTAACAGATATGTTAGCTATCTTAATTAAGCAGATTTCTAATTGGGGACGTTTA
GGTGCCACACTAGGAATGGGTTATTTAGCTGCATTCTTGTCCTCGATGATGAATAATATGCCAACGGTTATGATTAATGC
TTTGGCTATTCGGGCTAGTCATGTTACCGGGGTATTACATCAGAGTTTAGTTTTAGCAAATGTAGTTGGCTCCGATCTCG
GTCCAAAAATTACACCAATTGGGTCACTAGCAACATTAGTTTGGTTACATGTGTTAAGCCAAAAAGGTATAAAAATTAAA
TGGGGAACTTACTTTAAAATAGGTATTACAGTCACCATTCCAGTTTTATTTGTGACTTTAATTGGACTATATGTGTCATT
GTCAATTTTTCATTAA

Protein sequence : 
MEVFLAISIFLLTLILVIWQPRGLSIGWSAAGGAVLALVFGVVSFNDVGTVTVIVWNATLSFVSIILISLILDQIGFFEW
AALHMAQLARGNGVMMFILIAVLGTVVAALFANDGAALILTPIVLSMVRALKFDDKKIFPFIIASGFIADATSLPLVVSN
LVNIVSADFFGFTFSEYALRMWIPDLFSLGISILILYLYFRKAIPKEFDGSHLGSPKDAIKDLRLFYLSWVVLTALLIGY
FLSSFIKAPVSLIALPIAAIFLLLARKSPKVDVLATIKSAPWSIVAFSIGMYVVVYGLQNAGLTDMLAILIKQISNWGRL
GATLGMGYLAAFLSSMMNNMPTVMINALAIRASHVTGVLHQSLVLANVVGSDLGPKITPIGSLATLVWLHVLSQKGIKIK
WGTYFKIGITVTIPVLFVTLIGLYVSLSIFH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 2e-109 66
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 2e-106 66
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 8e-107 65
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 3e-84 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsB YP_005005800.1 arsenical pump membrane protein BAC0574 Protein 2e-109 67
arsB YP_005005800.1 arsenical pump membrane protein BAC0575 Protein 2e-109 66
arsB YP_005005800.1 arsenical pump membrane protein BAC0031 Protein 2e-80 55
arsB YP_005005800.1 arsenical pump membrane protein BAC0576 Protein 2e-85 55
arsB YP_005005800.1 arsenical pump membrane protein BAC0577 Protein 1e-86 55
arsB YP_005005800.1 arsenical pump membrane protein BAC0578 Protein 1e-85 55