Gene Information

Name : xerD (PECL_897)
Accession : YP_005004842.1
Strain : Pediococcus claussenii ATCC BAA-344
Genome accession: NC_016605
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 898140 - 899027 bp
Length : 888 bp
Strand : +
Note : -

DNA sequence :
TTGAACGATCTAATTAACGACTATCTTCATTCTCTTCGTGTTGAAAAGGGGCTATCTGAAAATACTATTATTAGCTATCG
TCAAGAATTAGTTCGGTTTAGGGACTATTTAGCCCAAAAAGAAATCACAGATTTGACATCAATTGATCGATATCTTATTT
TAGATTATCTTAACGAATTGGATCAGCGAGGCCGCGCCAAGAATTCAATTATTCATACAGTATCGAGCTTGCGTAAGTTT
TTTAAGTATTTATTGATAGAGGAGAAAATCAACGATGACCCCATGGCCAATGTGGCACCGCCTAAAAAGTCGAAACATTT
ACCATCTGTTTTAACTTCTGATGAGGTTGAAAAGCTTCTGCGCGTACCAAATATACAAACCAATTTAGGGGTGCGAGATA
GATCCCTATTGGAGGTAATGTATGCCACTGGAATGCGGGTTAGTGAGGTTATTAATCTAACCCTATCAGAGTTGCATCTT
GAGATGGGATTAATAGAGACGATTGGAAAAGGTGATAAAAAAAGAATAATTCCAATCGGTGATATTGCAATTAAGTGGCT
CACTGAATACTTGACGATAGCTAGACCGCAATTATTAAAAACACAACACTTTGACCAAGTATTTCTAAATCAACGGGGAA
AGCCCTTGACTCGTCAAGGAGTTTGGAAAAATTTAAAAAAGATGGTACAAAGTGCTGGGATTAATAAGAATATTACGCCC
CACACTTTACGTCACTCGTTTGCTACTCATTTGTTAGAGAATGGTGCAGATTTAAGAATTGTACAGGAATTGTTAGGTCA
TTCAGACATTTCTACAACGCAAATTTACACACATGTCACACAGCAAAGATTAGCAAATGTATACGACAAATATCATCCTA
GGGCTTAA

Protein sequence :
MNDLINDYLHSLRVEKGLSENTIISYRQELVRFRDYLAQKEITDLTSIDRYLILDYLNELDQRGRAKNSIIHTVSSLRKF
FKYLLIEEKINDDPMANVAPPKKSKHLPSVLTSDEVEKLLRVPNIQTNLGVRDRSLLEVMYATGMRVSEVINLTLSELHL
EMGLIETIGKGDKKRIIPIGDIAIKWLTEYLTIARPQLLKTQHFDQVFLNQRGKPLTRQGVWKNLKKMVQSAGINKNITP
HTLRHSFATHLLENGADLRIVQELLGHSDISTTQIYTHVTQQRLANVYDKYHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-55 43
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-55 43