Gene Information

Name : smpB (PECL_556)
Accession : YP_005004531.1
Strain : Pediococcus claussenii ATCC BAA-344
Genome accession: NC_016605
Putative virulence/resistance : Unknown
Product : ssrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 562498 - 562971 bp
Length : 474 bp
Strand : +
Note : -

DNA sequence :
ATGGCCAAAAAGATTAAAGCCAAAGACGACTCTCTGGCACAAAATAAAAAGGCGCGTCATGATTATGCTATTTCAGATAC
GGTTGAAGCGGGTATTGCATTAACTGGAACTGAGATTAAGTCGGTTAGGGAGCGTAGAATTACGCTACGTGACGGATTTG
TTCAAGTTAGAAATGACGAAGCATATTTGATGAATGTTAACATTAGCGAATATGCTGAGGGTAATCAGTTTAATCATGAT
CCATTGCGAAATCGAAAGCTACTTTTGCATAAAAAGCAGATATTAGCGTTAGAAGAACAAACTAAGAATAAGGGAATTAC
AATTGTCCCCTTGAAGGTTTATTTAAAAAAAGGTTTTGCAAAGGTTTTGATTGGAGTAGCCAAAGGTAAGCGTGAATACG
ATAAACGACAGGATATCAAGAAACGCGATCAACAAAGAGAAATTGAGCGGACTCTGAGAAGACGGGCTAAATAA

Protein sequence :
MAKKIKAKDDSLAQNKKARHDYAISDTVEAGIALTGTEIKSVRERRITLRDGFVQVRNDEAYLMNVNISEYAEGNQFNHD
PLRNRKLLLHKKQILALEEQTKNKGITIVPLKVYLKKGFAKVLIGVAKGKREYDKRQDIKKRDQQREIERTLRRRAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 1e-40 58
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 2e-28 46