Gene Information

Name : nrdE (PECL_490)
Accession : YP_005004468.1
Strain : Pediococcus claussenii ATCC BAA-344
Genome accession: NC_016605
Putative virulence/resistance : Unknown
Product : ribonucleoside-diphosphate reductase subunit alpha
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 494575 - 496740 bp
Length : 2166 bp
Strand : -
Note : -

DNA sequence :
ATGGCACTCAAAGACTTAAAAGATGTCACCTATTATGATTTGAACAACGAAATTAATATTCCAGTGAATAATCAAATTCC
ACTAAACAAAGATCACGAGGCACTAGAAGCTTTTATTACTGAGAATATTCGTCCAAATACCATGACTTTTAATTCCATTC
AGGATCGCTTTGATTATCTAACTCGTGAAGATTACATTGATGAAAAAATCCTCAAGGAATACAGCCTAACCTTTATTGAG
AAATTGTATGATTTTTTAAAAAGTCAAAATTTTCACTTTAAGTCATTTATGGCGGCTTACAAATTCTACGCTCAATACGC
TCTACGCACAAATGATAATCAAACTTATTTAGAAAATTTTATTGATCGAGTTGCGATGAATGCCCTTTATTTCGCTGATG
GTGATGAAGACTTGGCTATAAATATTGCTGATGAAATCATCCATCAACGCTATCAACCTGCAACCCCTAGCTTTTTAAAT
GCTGGACGAAAACATCGGGGTGAACTGGTCTCTTGTTTTTTAATCCAAGCACAAGATGACATGAATTCAATTGGCCGAAC
CATTAATTCAGCGTTACAACTTTCAAAATTAGGTGGCGGAGTAGGAATCAATCTTAGCAATCTTCGGGAAGCCGGCGCTC
CTATCAAGGGAATTGAAGGTGCTGCAAGTGGTGTCGTTCCAGTTATGAAATTATTGGAAGACAGCTTTTCATATGCTAAT
CAGTTAGGCCAACGTCAAGGAGCTGGAGTTGTATACTTGAGTGTATTTCACCCTGACATTATCCAATTTCTATCAGCGAA
AAAAGAAAATGCGGATGAAAAAATTCGCGTTAAAACCCTCTCTCTTGGTGTAACTGTTCCTGATAAGTTTTACGATTTAA
TCAAAGCTGATGCTGACATGTATTTGTTCAGCCCATATAGTGTTGAAAAAGAGTATGGGAAGCCTTTCTCTTACATTAAT
ATAACTGAAGAATACGACAATATGGTTAATAACCCCAACATCACAAAAACCAAAATTAAAGCACGTAATCTTGAAAACGA
ATTATCCAAATTACAACAAGAATCAGGATACCCATACATTGTGAATGTTGACACTGCTAACCGTGAAAATCCAATTTATG
GAAAAATTGTTATGAGTAACCTTTGTTCTGAAATCATGCAAGTTCAGACTCCATCAGTAATTGATGATAAACAAGAGTAT
TCTTCTTTAGGGACTGATATTAGTTGTAACTTAGGTTCTACAAACATTGTTAATATGATGGCATCCCCTGATTTTGGAAA
ATCTGTCGATAGTATGGTTCGTGCACTGACATACGTCACTGACACTTCTAACATTGACGTTGTTCCTTCTATTCAAAATG
GAAATAAACTAGCTCACACAATCGGTTTAGGTGCGATGGGACTGCACGGTTATCTTGCTAAAAATCATCTATATTATGGG
GAAGATGCTTCAATTGAGTTCACTAGCGTCTACTTTATGCTTCTAAACTATTGGACCCTAAAAGCCTCCAATAAAATTGC
TCAGGAACGTCATCAATCATTTTATAATTTTGATAAGAGCAAATATGCTGACGGAACCTACTTTGATAAGTATATTACCA
AAGAATGGGGTCCAACCAGTGATACCGTGAAAAAACTTTATAACGGGATAATGATTCCCACAATCGATGATTGGAAACAA
TTAAAAGCTGATATTATGCAATTTGGACTTTATCATCAAAATCGTATGGCAGTAGCTCCAACTGGATCCATCTCATACAT
CAATGATTCAACTGCCAGCCTTCAACCAATTGTTAACCGTGTTGAAGAACGTCAAGAAAAGAAAATTGGTAAAATCTATT
ATCCAGCCCCATATTTATCAAATGATACTTTAAAGTATTATCAATCTGCTTATGATATTGATATGCGAAAAGTGATCGAT
ATTTACGGTGCAGCACAACAACATGTGGACCAGGGTATGAGTATGACATTATTTATGCGTTCAACAATTCCGGCTGGAAC
TTATGAATGGAAAGATGGTAGAACCGAAAAAATGACAACTCGCGACCTTAACATTCTGCGTAACTATGCTCATCGTAAAG
GGCTTAAATCTATTTACTATATTCGGACCTTTACTGACAACGATGGTGAAGTTGGCGTAAATCAATGTGAAAGTTGCTCA
ATCTAA

Protein sequence :
MALKDLKDVTYYDLNNEINIPVNNQIPLNKDHEALEAFITENIRPNTMTFNSIQDRFDYLTREDYIDEKILKEYSLTFIE
KLYDFLKSQNFHFKSFMAAYKFYAQYALRTNDNQTYLENFIDRVAMNALYFADGDEDLAINIADEIIHQRYQPATPSFLN
AGRKHRGELVSCFLIQAQDDMNSIGRTINSALQLSKLGGGVGINLSNLREAGAPIKGIEGAASGVVPVMKLLEDSFSYAN
QLGQRQGAGVVYLSVFHPDIIQFLSAKKENADEKIRVKTLSLGVTVPDKFYDLIKADADMYLFSPYSVEKEYGKPFSYIN
ITEEYDNMVNNPNITKTKIKARNLENELSKLQQESGYPYIVNVDTANRENPIYGKIVMSNLCSEIMQVQTPSVIDDKQEY
SSLGTDISCNLGSTNIVNMMASPDFGKSVDSMVRALTYVTDTSNIDVVPSIQNGNKLAHTIGLGAMGLHGYLAKNHLYYG
EDASIEFTSVYFMLLNYWTLKASNKIAQERHQSFYNFDKSKYADGTYFDKYITKEWGPTSDTVKKLYNGIMIPTIDDWKQ
LKADIMQFGLYHQNRMAVAPTGSISYINDSTASLQPIVNRVEERQEKKIGKIYYPAPYLSNDTLKYYQSAYDIDMRKVID
IYGAAQQHVDQGMSMTLFMRSTIPAGTYEWKDGRTEKMTTRDLNILRNYAHRKGLKSIYYIRTFTDNDGEVGVNQCESCS
I

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 0.0 51