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Name : lysS (PECL_276) Accession : YP_005004275.1 Strain : Pediococcus claussenii ATCC BAA-344 Genome accession: NC_016605 Putative virulence/resistance : Virulence Product : lysine--tRNA ligase Function : - COG functional category : - COG ID : - EC number : - Position : 280037 - 281536 bp Length : 1500 bp Strand : + Note : - DNA sequence : GTGGCGCAAAAGAAGCAAGCAGATGTAATGAACGATCAATTAAGGGTTCGTCGTGAAAAAATGGACGAGTTAAGAGAAAA GGGAATTGATCCCTTTGGACATCGTTTTGAGCGTACTTATTTAGCTGGAGATTTACACAAAGAATTTGGCGATCTAGGTA AGGAAGCCTTAGAAGAAAAAAACATTGTAGCGACGATCGCTGGTCGTATGATGTCGAAACGTCGCAAGGGTAAAGTTGCC TTTGCGGATATTAAGGATCGTTCTGGTAAAATTCAACTTTATGTCCGTAAAGATGAGGTTGGAGAAGACCAATACGAAAT CTTTAAACGTTCGGATATCGGTGACTTTTTTGGTATTACCGGCGAAGTCATGAAGACGGATATGGGAGAGCTGACAATCA AAGTAACTGAGCTAACTTTCCTAACTAAAGCACTTCGCCCATTGCCCGAAAAGTTTCATGGCCTACAAAATGTTGAACAA ATTTATCGTCAAAGATATTTAGATTTAATTTCAAATGACGATAGTATGGATCGCTTTAAAAAACGCTCTAAGATTGTTTC TGCTGTACGTCGTTATTTGGATGGCGATGGATTTACTGAAGTGGAAACGCCGGTGCTTCATACCCAAGCTGGTGGTGCCA ACGCACGTCCATTTATTACACATCATAATGCTTTGGATATCGATTTATACCTAAGAATTGCACTTGAATTACATCTTAAG AGATTGATTGTAGGTGGAATGGAACGAGTATATGAAATTGGTCGTGTATTTCGTAATGAGGGTATCGATACGCGCCATAA TCCTGAGTTTACAATGTTAGAATCTTATGCAGCATACTATGATTTTCACGATGTAATGGATGAAACTGAAGGCATTTTCA AGGCAGCAGTTAAGGCTGTTTCAGATGATGGTAAGATTACATATCAAGGAACTGAGCTTGATTTAGGCCAAGAATTTGGG CGGATGCATATGGTTGACGCCATTAAGAAGTTTACTGGAATTGATTTTTGGGCACCAATGTCAATTGAAGATGCTAAAAA GTTGGCAGACGATAACGGTATTCACTACGAAACATGGTGGACAGTTGGTCATATTATTAATGAATTCTTTGAAGAAAAGG TGCAGGATCAATTGGAACAGCCAGTGTTTATTTATGGACATCCAGTCGAAATTTCTCCATTAGCTAAGAAAAATGCTGAT GATCCTAGATTTACGGATCGTTTTGAGTTATACATCTTGGGTAATGAATACGGGAATGCCTTTACAGAATTAAATGATCC AATAGATCAACGCGCTCGTTTTGAAGCACAAGTAGCTGAAAGAAAAGCGGGAAATGACGAGGCGGAAGGTATTGACGAAG ATTACGTTGAAGCTCTCGAATATGGCATGCCGCCAACAGGTGGGTTAGGAATTGGAATTGACCGATTGGTAATGCTATTG ACGGATGCACCATCGATTCGCGATGTCCTATTGTTCCCTACTATGCGTCCAATTGATTAG Protein sequence : MAQKKQADVMNDQLRVRREKMDELREKGIDPFGHRFERTYLAGDLHKEFGDLGKEALEEKNIVATIAGRMMSKRRKGKVA FADIKDRSGKIQLYVRKDEVGEDQYEIFKRSDIGDFFGITGEVMKTDMGELTIKVTELTFLTKALRPLPEKFHGLQNVEQ IYRQRYLDLISNDDSMDRFKKRSKIVSAVRRYLDGDGFTEVETPVLHTQAGGANARPFITHHNALDIDLYLRIALELHLK RLIVGGMERVYEIGRVFRNEGIDTRHNPEFTMLESYAAYYDFHDVMDETEGIFKAAVKAVSDDGKITYQGTELDLGQEFG RMHMVDAIKKFTGIDFWAPMSIEDAKKLADDNGIHYETWWTVGHIINEFFEEKVQDQLEQPVFIYGHPVEISPLAKKNAD DPRFTDRFELYILGNEYGNAFTELNDPIDQRARFEAQVAERKAGNDEAEGIDEDYVEALEYGMPPTGGLGIGIDRLVMLL TDAPSIRDVLLFPTMRPID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-116 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_005004275.1 | lysine--tRNA ligase | VFG1668 | Protein | 2e-116 | 49 |
