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Name : clpC (PECL_1315) Accession : YP_005005223.1 Strain : Pediococcus claussenii ATCC BAA-344 Genome accession: NC_016605 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpC Function : - COG functional category : - COG ID : - EC number : - Position : 1278748 - 1281225 bp Length : 2478 bp Strand : - Note : - DNA sequence : ATGGATAACTTATTTACACCCAGTGCAAAAAATGTATTAATGATTGCACAGGAACAAGCAAAGAAATTCAAACATCCAGC AGTTGGAACTGAGCATTTATTACTAGCACTCACAATTGAGCAAAATGGAGTTGCTAAAAGTGTATTGGACCAATTTAACG TTCAAGAAGTGGATGTAACAGAAGAAATTGAAAGTTTCACAGGATATGGTAACCTGACTTCTCGTAAGAATGATTACTTA CCTTATTCTCCTAAGGCAAAAGAAATTTTGAGTTTGGCAGGTGACGAAGCTAAACAATTAAAGTCAAGCAAGATTGGAAC TGAGCATTTGCTATTGGCCCTGTTACAGGATGATTCGATTTTATCGTCTAGAATTCTAGCAGCGCTTGATATTAGTGTGA GCGATGTGCAAAAGGTTGCGCTACGTAAGCTTGGTGTTAATCCAGCGGTGCGCGCTCGTCAAGCTCGTCAACGTCAAACT AATGGTGGGCAAAGTAGTGCAACGCCAACTTTAGATTCAGTTGCAAGAGACCTAACTGAAATGGCCGCAGAAGGGCAGAT TGACCCTGTTGTTGGACGTAGTAAGGAAGTCCGACGAGTTATTCAGATATTAAGCAGGAGAACTAAGAATAATCCTGTAT TGATTGGGGAACCAGGGGTTGGTAAAACTGCTATTGCTGAAGGATTGGCACAAAGAATCGTAGATGGTGATGTTCCCGAA GATATGCAGAATAAACGTCTGATGATGCTTGAAATGGGCTCTTTAGTGGCTGGTACAAAGTATCGTGGTGAATTTGAGGA TCGTTTAAAAAAGGTGATTGAAGAGATTCGTACTGATAAAGGTATCATTCTCTTTATCGATGAATTGCACACTTTGATAG GTGCTGGTGGCGCAGAAGGGGCTATTGATGCTTCCAATATTTTGAAGCCTGCATTAGCCCGTGGCGAACTACAAACGATT GGTGCCACAACTCTAAATGAATACCAAAAATATATTGAATCAGATGCCGCCTTAGAACGACGCTTTGCGAGAGTTGAGGT AAACGAACCTACTGAGGATGAAGCAATTCAGATTTTGAAGGGGTTACGAGGTAAGTATGAAGAACACCATCACGTTGAAA TAACTGATGAAGCAATTGTGGAAGCAGTAAAACTATCTTCACGTTATATTTCAGATCGTTACCTTCCTGATAAGGCAATT GATTTAATTGATGAGGCTGCCGCTAAGATTAGGATTGACGGCTCTGAAAAACCAGATTCAAAGAGCAAAAACGAGGCCAA GCTGGCAGAGTTGCGTCAGGAAAAAGAGGACGCAATTGATGCTCAAGAGTTTGAAAAAGCAGCTACAATTCGTGAAAAAG AGTTTAAGCTTGCTAAAAAAGTGGAAAAACAGAACAACGACAGTGAAAAGGCCGATAGTAAGAATGAGTATGATTTAGTT GAAACGGCGGAAAGTGTTGCTGAAATCGTTTCTGACTGGACAGGGGTTCCGTTAACTCATTTGGAACAAGCTGAATCAGA TCGCCTAATTAATTTAGAAAAAACTCTGCATGAGCGAGTTATTGGACAAGACGAAGCGGTGTCGGCTGTTGCACGTGCAA TAAGAAGAGCACGTTCTGGGCTAAAGGATCCTAAGCGACCTATTGGTTCGTTTATGTTTCTTGGACCTACAGGAGTTGGT AAAACCGAGTTAGCCAAGACTTTGGCTGATGTAATGTTTGGTTCTGAAGATAACATGATTCGAATTGATATGTCTGAGTA CATGGAAAGGTATAGTACGAGTCGTTTAGTTGGTTCGGCGCCTGGATACGTCGGATATGATGAAGGTGGACAACTTACTG AACAGGTTCGACGTAAACCTTACTCAGTTGTGTTATTCGATGAGGTTGAAAAAGCACATCCCGATGTATTTAATCTCCTT TTGCAAGTACTTGACGATGGATTTTTAACTGACTCCAAGGGACGCAGAGTCGATTTTCGAAATACTATTTTGATAATGAC TTCTAACCTAGGTGCAACAGCATTACGTGATGAAAAGTCTGTTGGCTTTGCAGCTAAGAATGCTTCTGAAGATTACAATG CAATGTCTGCTAAGGTTCGTGAGATTTTAAAGCAGAGTTTCCGTCCAGAATTCTTGAACCGGATTGATGAAACGATTATT TTCCATTCACTTACTAAGGAGGAATTACATTCAATTGTTAAATTAATGGCAAAAGATGTGATTTTGAGAATGAGTGAGCA GGGCATTAATACTAAGTTGACACCTGCCGCAATTGATGCAGTTGCAGATGCTGGATTTGATCCAGAGTTTGGGGCACGAC CAATTAGGAGGGCTTTACAAACTGACGTTGAGGATAAATTGAGTGAATTAATTTTATCAGGTGAAGCTACTGTAGGTGAT GACGTGACGGTCGGTGCGAGAAACGGGAAAATCACATTTAAGGTTTCTTCGGTACAAAAAAATAAAGTAAATAATTAA Protein sequence : MDNLFTPSAKNVLMIAQEQAKKFKHPAVGTEHLLLALTIEQNGVAKSVLDQFNVQEVDVTEEIESFTGYGNLTSRKNDYL PYSPKAKEILSLAGDEAKQLKSSKIGTEHLLLALLQDDSILSSRILAALDISVSDVQKVALRKLGVNPAVRARQARQRQT NGGQSSATPTLDSVARDLTEMAAEGQIDPVVGRSKEVRRVIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVDGDVPE DMQNKRLMMLEMGSLVAGTKYRGEFEDRLKKVIEEIRTDKGIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQTI GATTLNEYQKYIESDAALERRFARVEVNEPTEDEAIQILKGLRGKYEEHHHVEITDEAIVEAVKLSSRYISDRYLPDKAI DLIDEAAAKIRIDGSEKPDSKSKNEAKLAELRQEKEDAIDAQEFEKAATIREKEFKLAKKVEKQNNDSEKADSKNEYDLV ETAESVAEIVSDWTGVPLTHLEQAESDRLINLEKTLHERVIGQDEAVSAVARAIRRARSGLKDPKRPIGSFMFLGPTGVG KTELAKTLADVMFGSEDNMIRIDMSEYMERYSTSRLVGSAPGYVGYDEGGQLTEQVRRKPYSVVLFDEVEKAHPDVFNLL LQVLDDGFLTDSKGRRVDFRNTILIMTSNLGATALRDEKSVGFAAKNASEDYNAMSAKVREILKQSFRPEFLNRIDETII FHSLTKEELHSIVKLMAKDVILRMSEQGINTKLTPAAIDAVADAGFDPEFGARPIRRALQTDVEDKLSELILSGEATVGD DVTVGARNGKITFKVSSVQKNKVNN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 51 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-91 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_005005223.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0079 | Protein | 0.0 | 58 |
| clpC | YP_005005223.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0080 | Protein | 2e-146 | 51 |
| clpC | YP_005005223.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG2084 | Protein | 1e-91 | 41 |
