Gene Information

Name : MycrhN_5650 (MycrhN_5650)
Accession : YP_005003333.1
Strain : Mycobacterium rhodesiae NBB3
Genome accession: NC_016604
Putative virulence/resistance : Resistance
Product : beta-lactamase class A
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5724463 - 5725362 bp
Length : 900 bp
Strand : -
Note : PFAM: Beta-lactamase

DNA sequence :
ATGACTGAACTGTCCCGGCGGCACGTTCTGCTCGGCGGATTGACCCTCGCCGCAGTGGCCGCAACTTCAGAGAAACCTGC
GTTGGCCGACCCGGCGGAGCCGCCGTCGTTGTCCGTCGAGGCTTTGATCCAAGGCCTGGAACAGAAGCACAACGCCTCCA
TCGGCGTGTTCGCGACGAACCTGGCGTCCGGCAAGACCGTCGCTCATCGCGCGCAGGAGCCGTTCGCGATGTGCTCGACG
TTCAAGGCGTACGCCTCAGGCCGCATCCTGCAGATGGCACAACACGGTGAGTTGTCGTTGGACGATCCGATGTTCGTCGA
TCCGGCCGGGATCTTGCCGAATTCGCCCGTCACGGCACCGCGCGCCGGCGGTGAGATGACGCTCGCCGAGCTGTGCCAGG
CAGTGTTGCAGCAGAGCGACAATGCGGGCGCCAACATTCTGCTGAACAGAATCGGCGGTCCGCAGGCGATCACGGCGTTT
GCGCGCAGCATCGGCGACCACCAGACGCGGCTGGACCGCTGGGAGACTGAGCTGAACTCGGCGATCCCCGGCGACCTCCG
CGACACCAGCACGCCCGAGGCGCTCGGCGCGGGTTTCCGCGCTCTACTCGACGGAGACGTCCTGGCACCGCCCCAGCGCG
GATTGCTCGACGACTGGATGCGCGCCAATCAGACGTCGAGCATGCGACCCGGACTTCCAGCGGGCTGGACCAGCGCCGAC
AAGACCGGCAGCGGGGACTACGGCAGCACGAACGACGTCGGGATCGCGTACGGGCCAGAGGGGCAGCGTGTTCTGCTCGC
GATCATGACGCGAACTCAGGCCAACGATCCCAAGGCCGAGAACCTGCGCCCACTCATCGGAGAAGTGACCACGCTGGTGA
TGCCGACGCTGCTCGCGTAG

Protein sequence :
MTELSRRHVLLGGLTLAAVAATSEKPALADPAEPPSLSVEALIQGLEQKHNASIGVFATNLASGKTVAHRAQEPFAMCST
FKAYASGRILQMAQHGELSLDDPMFVDPAGILPNSPVTAPRAGGEMTLAELCQAVLQQSDNAGANILLNRIGGPQAITAF
ARSIGDHQTRLDRWETELNSAIPGDLRDTSTPEALGAGFRALLDGDVLAPPQRGLLDDWMRANQTSSMRPGLPAGWTSAD
KTGSGDYGSTNDVGIAYGPEGQRVLLAIMTRTQANDPKAENLRPLIGEVTTLVMPTLLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
blaCTX-M2 ACF06162.1 beta-lactamase CTX-M2 Not tested Tn5036-like Protein 9e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MycrhN_5650 YP_005003333.1 beta-lactamase class A EU555534.1.gene1.p01 Protein 2e-42 45
MycrhN_5650 YP_005003333.1 beta-lactamase class A GQ140348.1.gene1.p01 Protein 1e-41 45
MycrhN_5650 YP_005003333.1 beta-lactamase class A HQ641421.1.gene1.p01 Protein 6e-42 45
MycrhN_5650 YP_005003333.1 beta-lactamase class A AF395881.gene.p01 Protein 3e-42 45
MycrhN_5650 YP_005003333.1 beta-lactamase class A FJ234412.1.gene1.p01 Protein 2e-42 45
MycrhN_5650 YP_005003333.1 beta-lactamase class A HM066995.1.gene1.p01 Protein 3e-41 45
MycrhN_5650 YP_005003333.1 beta-lactamase class A AF297554.1.gene1.p1 Protein 7e-42 45
MycrhN_5650 YP_005003333.1 beta-lactamase class A AY034847.1.gene1.p01 Protein 3e-42 45
MycrhN_5650 YP_005003333.1 beta-lactamase class A EU729727.1.gene1.p1 Protein 2e-42 45
MycrhN_5650 YP_005003333.1 beta-lactamase class A JF949915.1.gene1.p01 Protein 2e-35 42
MycrhN_5650 YP_005003333.1 beta-lactamase class A JF949916.1.gene1.p01 Protein 1e-35 42
MycrhN_5650 YP_005003333.1 beta-lactamase class A DQ836922.1.gene1.p01 Protein 1e-35 42
MycrhN_5650 YP_005003333.1 beta-lactamase class A AY070258.1.gene1.p1 Protein 2e-35 42
MycrhN_5650 YP_005003333.1 beta-lactamase class A AM176549.2.gene1.p01 Protein 2e-35 42
MycrhN_5650 YP_005003333.1 beta-lactamase class A CP000647.1.gene1607. Protein 3e-35 42
MycrhN_5650 YP_005003333.1 beta-lactamase class A DQ322460.1.gene1.p1 Protein 2e-35 42
MycrhN_5650 YP_005003333.1 beta-lactamase class A DQ013287.1.gene1.p1 Protein 1e-35 42
MycrhN_5650 YP_005003333.1 beta-lactamase class A AF467947.1.gene1.p1 Protein 2e-35 42
MycrhN_5650 YP_005003333.1 beta-lactamase class A AM176557.2.gene1.p01 Protein 3e-35 42
MycrhN_5650 YP_005003333.1 beta-lactamase class A AM176555.2.gene1.p01 Protein 3e-35 42
MycrhN_5650 YP_005003333.1 beta-lactamase class A JX268752.1.gene1.p01 Protein 3e-35 42
MycrhN_5650 YP_005003333.1 beta-lactamase class A EF418608.1.gene1.p01 Protein 1e-38 42
MycrhN_5650 YP_005003333.1 beta-lactamase class A AY072920.1.gene1.p1 Protein 5e-37 42
MycrhN_5650 YP_005003333.1 beta-lactamase class A FJ919776.1.gene1.p01 Protein 5e-37 42
MycrhN_5650 YP_005003333.1 beta-lactamase class A JN051143.1.gene1.p01 Protein 2e-35 42
MycrhN_5650 YP_005003333.1 beta-lactamase class A AF148850.1.gene1.p01 Protein 3e-35 42
MycrhN_5650 YP_005003333.1 beta-lactamase class A EU274581.1.gene1.p1 Protein 2e-35 42
MycrhN_5650 YP_005003333.1 beta-lactamase class A AF299299.1.gene1.p01 Protein 3e-35 42
MycrhN_5650 YP_005003333.1 beta-lactamase class A AY528718.1.gene1.p01 Protein 1e-35 42
MycrhN_5650 YP_005003333.1 beta-lactamase class A HQ661363.1.gene1.p1 Protein 3e-35 42
MycrhN_5650 YP_005003333.1 beta-lactamase class A AM176558.2.gene1.p01 Protein 3e-35 42
MycrhN_5650 YP_005003333.1 beta-lactamase class A AF226622.1.gene1.p01 Protein 2e-35 42
MycrhN_5650 YP_005003333.1 beta-lactamase class A FJ668814.gene1.p01 Protein 3e-35 42
MycrhN_5650 YP_005003333.1 beta-lactamase class A AY263404.1.gene1.p1 Protein 2e-35 42
MycrhN_5650 YP_005003333.1 beta-lactamase class A DQ174305.1.gene1.p01 Protein 3e-35 42
MycrhN_5650 YP_005003333.1 beta-lactamase class A AY130282.1.gene1.p1 Protein 4e-36 41
MycrhN_5650 YP_005003333.1 beta-lactamase class A AY130285.1.gene1.p1 Protein 2e-36 41
MycrhN_5650 YP_005003333.1 beta-lactamase class A AY130284.1.gene1.p1 Protein 2e-36 41
MycrhN_5650 YP_005003333.1 beta-lactamase class A HQ833652.1.gene1.p01 Protein 3e-39 41
MycrhN_5650 YP_005003333.1 beta-lactamase class A EF581888.1.gene1.p01 Protein 3e-39 41
MycrhN_5650 YP_005003333.1 beta-lactamase class A AB284167.2.gene1.p01 Protein 2e-39 41
MycrhN_5650 YP_005003333.1 beta-lactamase class A DQ663489.gene.p01 Protein 1e-36 41
MycrhN_5650 YP_005003333.1 beta-lactamase class A AJ416344.1.gene1.p01 Protein 7e-38 41
MycrhN_5650 YP_005003333.1 beta-lactamase class A DQ125241.gene.p01 Protein 6e-38 41
MycrhN_5650 YP_005003333.1 beta-lactamase class A DQ408762.1.gene1.p1 Protein 6e-39 41
MycrhN_5650 YP_005003333.1 beta-lactamase class A GQ149244.1.gene1.p01 Protein 5e-38 41
MycrhN_5650 YP_005003333.1 beta-lactamase class A EF374097.1.gene1.p01 Protein 4e-38 41
MycrhN_5650 YP_005003333.1 beta-lactamase class A GU127598.1.gene1.p1 Protein 8e-38 41
MycrhN_5650 YP_005003333.1 beta-lactamase class A GQ149243.1.gene1.p01 Protein 2e-38 41
MycrhN_5650 YP_005003333.1 beta-lactamase class A HM776707.1.gene1.p1 Protein 6e-38 41
MycrhN_5650 YP_005003333.1 beta-lactamase class A X92507.1.gene1.p01 Protein 6e-38 41
MycrhN_5650 YP_005003333.1 beta-lactamase class A AJ567481.1.gene1.p01 Protein 5e-38 41
MycrhN_5650 YP_005003333.1 beta-lactamase class A AB205197.1.gene1.p01 Protein 2e-37 41
MycrhN_5650 YP_005003333.1 beta-lactamase class A AY157676.1.gene1.p01 Protein 3e-38 41
MycrhN_5650 YP_005003333.1 beta-lactamase class A GQ870432.1.gene1.p1 Protein 3e-37 41
MycrhN_5650 YP_005003333.1 beta-lactamase class A FJ971899.1.gene1.p1 Protein 2e-37 41
MycrhN_5650 YP_005003333.1 beta-lactamase class A HM167760.1.gene1.p01 Protein 1e-37 41
MycrhN_5650 YP_005003333.1 beta-lactamase class A AY954516.1.gene1.p1 Protein 1e-37 41
MycrhN_5650 YP_005003333.1 beta-lactamase class A AF189721.1.gene1.p01 Protein 8e-38 41
MycrhN_5650 YP_005003333.1 beta-lactamase class A HQ913565.1.gene1.p01 Protein 1e-38 41
MycrhN_5650 YP_005003333.1 beta-lactamase class A HM246246.1.gene1.p1 Protein 2e-36 41
MycrhN_5650 YP_005003333.1 beta-lactamase class A FJ360884.1.gene1.p01 Protein 2e-36 41
MycrhN_5650 YP_005003333.1 beta-lactamase class A AJ277415.1.gene1.p01 Protein 6e-36 41
MycrhN_5650 YP_005003333.1 beta-lactamase class A Y10280.1.gene1.p01 Protein 3e-36 41
MycrhN_5650 YP_005003333.1 beta-lactamase class A Y10279.1.gene1.p01 Protein 2e-36 41
MycrhN_5650 YP_005003333.1 beta-lactamase class A AJ277414.1.gene1.p01 Protein 7e-36 41
MycrhN_5650 YP_005003333.1 beta-lactamase class A AF468003.1.gene1.p1 Protein 1e-36 41