Gene Information

Name : MycrhN_4773 (MycrhN_4773)
Accession : YP_005002469.1
Strain : Mycobacterium rhodesiae NBB3
Genome accession: NC_016604
Putative virulence/resistance : Unknown
Product : transposase, IS30 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4833777 - 4834964 bp
Length : 1188 bp
Strand : +
Note : PFAM: Integrase core domain

DNA sequence :
GTGGCCGATGCCGCCGCGGCGGCTGGTGTGTCGGAGGCGTCGGGATTCCGGTGGGTGCGAAAGGCTGGCGGCATGGCCAA
CCTCGCGAAATACCGTGATGCCTGCCCTATTTTGCTGAATGGTGTTGCTGATGTGACGGTGCTGCGCAGCCCGGAGTCCG
ATGCCGAGCCGCCGCCGGGTGCGGCGTTGTCGTTCACCGAACGCTGCCGTATCGAAGCGTTGCTCACCGAGGGGCAGATC
CCGGCGCAGATTGCCCGGCTGCTGGGCCGGCATCGGTCGACGATCACCCGGGAGATCGCACGCGGTATGACTAGCGGCGA
CAGCTACCGCGCGATCCGCGGTCAGTGCGAGTACGAGACGAGGATGGCGCGACCGAAGGTGCGTCGACTCCAAGCCAACC
CTGCCCTGCTGGCCGAGGTTCTGTCAGGCTTGAAGAAGCGCTACAGCCCGCGACAGATCGCGGGCCGGCTGCGCCTGGAC
TTCCCCGATGATCCGGAGATGTGGGTGTCACACGAGACGATCTATCAGGCCATTTACGTCCAGCCGCGGGGCGAGCTAGC
CCGGCTGATGAAGGCGGCGCTGCGCACTGGGCGGATCAAACGCAAACCCCAGGGCCGTCAGGCTCAGCAGGGGCGCGGCA
AGCTCAAGGACATGATTTCGATCAGCGATCGACCCAAGGAAGCCGACGATCGCGCAATCCCCGGGCATTGGGAAGGTGAC
CTCATCCTCGGCGCCAACAACGCCTCGGCGATCGGAACGCTGGTGGAGCGCACCACCGGCTTTGTGCTGTTGCTGCACCT
GCCCGGTGATCACACCGCCGAGACAGTGGCCGCGGCGATGATCGCCAAGATGCCCGAGCTTCCCGAGATCCTGTGGCGGT
CGCTGACATGGGACCAGGGCCGCGAGATGGCACTGCACACCAAGATCACCGAGGCGACCGGGCTGCCGATCTACTTCTGC
GACCCGCACAGCCCGTGGCAGCGCGGCAGCAACGAGAACACCAACGGTCTTGTGCGACAGTATTTTCCAAAAGGAACCGA
CCTGTCCTTCCACGGCCCCGGCATCCTGGACAACGTGGCCGCCGAACTCAACGGCCGACCCCGCGAACGCTTCGGCTGGA
AGACCCCAGCCGAAATGCTCGACAAGCTACTATCCGATCCAAACCAATCTGTTGCGGCCACCGCTTGA

Protein sequence :
MADAAAAAGVSEASGFRWVRKAGGMANLAKYRDACPILLNGVADVTVLRSPESDAEPPPGAALSFTERCRIEALLTEGQI
PAQIARLLGRHRSTITREIARGMTSGDSYRAIRGQCEYETRMARPKVRRLQANPALLAEVLSGLKKRYSPRQIAGRLRLD
FPDDPEMWVSHETIYQAIYVQPRGELARLMKAALRTGRIKRKPQGRQAQQGRGKLKDMISISDRPKEADDRAIPGHWEGD
LILGANNASAIGTLVERTTGFVLLLHLPGDHTAETVAAAMIAKMPELPEILWRSLTWDQGREMALHTKITEATGLPIYFC
DPHSPWQRGSNENTNGLVRQYFPKGTDLSFHGPGILDNVAAELNGRPRERFGWKTPAEMLDKLLSDPNQSVAATA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDC7B_2059 YP_005163500.1 transposase-like protein Not tested Not named Protein 3e-54 42
CDC7B_2034 YP_005163475.1 transposase-like protein Not tested Not named Protein 3e-54 41
DIP0764 NP_939135.1 transposase Not tested Not named Protein 3e-54 41