|
Name : MycrhN_4642 (MycrhN_4642) Accession : YP_005002343.1 Strain : Mycobacterium rhodesiae NBB3 Genome accession: NC_016604 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 4659431 - 4662763 bp Length : 3333 bp Strand : - Note : PFAM: Uncharacterized conserved protein (DUF2156); tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial DNA sequence : ATGACCGTCACTAGTCCGCCCGGCTCAGCGAGCACTGCAAAGACGCGACGCTCTTCCGCGTTCAGGTGGGTGCCCGCCGC GGCCGGCTGGACTGTCGGCATCATCGCCACGCTGTCGCTGTTCGCCAGTGTGTCGCCGTTCTTCCGGTCACTGATCAAGG TGCCGCGCGAATTCGTCAACGACTACGTCTTCAACTTCCCCGACACCAGCTTCGCGTGGGCGTTCGTGCTGGTGCTGCTG GCCGCGGCGCTGGCCGCCCGCAAGAGCATCGCGTGGTGGATCCTCGTCGGATACATGATCGCGGCGCTCGGCTGGAACGT CGGCGACCTCCTCTCCGGCGACGAATCGTGGTTGGAGGAAAGCGGCGAGGTCATCGGGCTCGCGTTCCACGTCGCAGCCA TCGCGTTCCTCGTGCTGGCTCGCAAGGAATTCTGGGCCAAGGTGCGCCGCGGCGCGCTGATCAAAGCGGCGGCAACGCTT GTCGCCGGCTTGGTCGTCGGCACCCTGATCGGATGGGGACTGCTCGAACTCTTCCCCGGAAGTCTGGCCCGCGAGGACCG CTTCTTCTACGCGCTGAACCGCGTCGGGGCGTTCGCCGGCGCCAGCGCAGACGCATTCACCGGCCATCCGCACGTCATCG TCAACGCGCTACTTGGTCTGTTCGGCGCCCTGGCGCTGATGGTGGCTGCGATCGTGCTGTTCCAGTCTCAACATGCGGAG AACGCGCTCACCGGTGAGGACGAGTCGGCGATCCGTGGACTGCTCGAGTTGTACGGCAAGAACGACTCGTTGGGCTACTT CGCGACGCGCCGCGATAAGTCGGTGGTCTTCGCACCCAACGGCCGAGCCGCCGTCACCTATCGCGTCGAGGTCGGCGTCT GCCTCGCCAGCGGGGATCCCGTCGGCGATCCCAAGGCCTGGCCGCAGGCGATCGAGGCGTGGCTGGCGCTGTGCGGCGAC TACGGCTGGGCACCGGGTGTGATGGGTGCGAGTTCGGCTGGCGCCGAGGCCTTCCGCGCGTCCGGTCTCAACGCCCTGCA GCTCGGCGATGAGGCGATCCTGTATCCGGACAGTTTCCGGTTGTCGGGTCCGGATATGCGTGCGGTGCGCCAGGCGGTGA CGCGCGCGCGGCGCGCAGGAGCATCGGTGCGGATTCGCAGACATCGCGATCTCGACGCCGACGAAATGGCCAGTGTGATC GAGCGGGCCGATTCCTGGCGTGACACCGACGACGAACGCGGCTTCTCCATGGCGCTTGGTCGGCTCGGCGACCCGGCCGA CGGCGACTGCCTACTGGTCGAGGCCGTGCAGCCCGGAGCCGGCGGCGATCAAGTCGTCGCGATGCTGTCGCTGGTGCCGT GGGGGGCAAACGGTGCGTCGCTGGATCTGATGCGCCGATCGCCCCAATCCCCCAACGGCACCATCGAACTCATGGTCAGC GAGCTGTGCATGCAGGCCGAAGGCATTGGCGTGACACGCGTTTCGCTGAACTTCGCGATGTTCCGCTCGGCGTTCGAACA GGGCGCCCAGCTCGGCGCCGGACCGATTGCGCGGTTGTGGCGTGCGCTGCTGGTGTTCTTCTCGCGCTGGTGGCAGCTCG AGACGCTGTACCGCTCGAACATGAAGTACCAGCCCGTGTGGGTGCCGCGCTATGCCTGCTACGAGGATGCGCGGCTGGTA CCGCGCGTCGGGGTGGCGTCGGTGATCGCGGAAGGCTTCCTGGTGCTTCCGTTCTCCCGTCGGCACGAGCAGCCGCACAC CGGCCACCACACCGCGGTGCCGCAGAGCATCGTCGACAGCGGTCTGCTGCACCACGACGGCACCGCCCCCGACGTCGACC AGCTCCAGGTGGGTCTTGACGAGGAGGAGCAGTCCCGGCTGCCCGAACAGGTACGGGTCCGGATGGCCAAGCTCAAGGCG TTGCAGGACAGCGGAATAGACGCCTATCCCGTCGGCGACGAACCCAGCCACACGATTCTCGCGGCGGTCGAATCCGAGGG TGCGGGCACGCTGACCGTGGCCGGGCGGGTGCTGCGCATTCGCGACTACGGCGGCGTGCTGTTCGCGCAGATGCGCGACT GGTCCGGGGAAGTCCAGCTGCTGCTTGACAATTCCCAACTCGAAGAGGGCACCACGGTCGACTTCACCCATGCCATCGAT CTCGGCGACCTGATCCAGGTATCGGGGACGATGGGCTACAGCAAGAAGGGCACCCGGTCACTGATCGTGCTCAGCTGGCG GTTGATCGGCAAGTGCCTACGCCCGCTGCCCGACAAGTGGAAAGGACTGACGGATCAGGAGGCCCGGGTACGTGCCCGTT ACGTGGACCTTGCGATCAACACCGAGGCACGCGATCTGATCCGGGCGCGCAGCGGTGTGCTGCACGCGATCCGCGAAACC CTGGTCGGCAAGGGGTTTTTGGAAGTCGAGACGCCGATCCTGCAGCAGATCCATGGCGGCGCCAACGCGAGGCCGTTCTT GACTCACATCAACGCCTACGACCTCGATCTGTACCTGCGCATCGCTCCTGAGCTGTACCTCAAGCGACTGTGCGTCGGTG GCGTCGAGCGGGTCTTCGAGCTGGGCCGCGCATTCCGCAACGAGGGCGTCGACTTCAGTCACAACCCCGAGTTCACGCTG CTGGAGGCGTATCAGGCACACGCGGATTACAACGTGTGGATCGATGGGTGTCGCGAGCTGATCCAGAACGCCGCGCTGGC AGCCAACGGAGCGCACGTGTTCATGCGTCCCCGAGACGACGGCACGCTGGAACCGGTCGACATCTCGGGCGTCTGGACGG TCAAAACCGTGCACGACGCAATATCGGAAGCGCTCGGCGAACAGATCGGCCCCGAGACGGACCTCACGACGCTGCGCAGG CTGTGTGACGGCGCGAAGATTCCGTATCTGACCCACTGGGACACCGGTGCGGTGGTGCTCGAACTGTATGAGCACCTGGT CGAGGACCGCACCGAAGCGCCCACGTTCTACAAGGACTTCCCCACCTCGGTGTCACCGCTGACGCGGCCGCACCGCAGCA TCCCCGGCGTCGCCGAGCGGTGGGACCTGGTGGCGTGGGGCGTCGAACTGGGAACCGCCTACAGCGAACTGACCGATCCG GTCGAGCAGCGGCGACGACTGCAGGAGCAGTCGCTGCTGGCCGCGGGCGGCGACCCTGAGGCGATGGAACTCGACGAGGA CTTTCTGCAGGCCATGGAGTACGCCATGCCGCCGACGGGTGGACTCGGAATGGGTGTGGACCGCGTCGTGATGCTGATCA CCGGCCGCAGCATCCGCGAGACGCTGCCCTTCCCGCTGGCCAAACCTCGTTGA Protein sequence : MTVTSPPGSASTAKTRRSSAFRWVPAAAGWTVGIIATLSLFASVSPFFRSLIKVPREFVNDYVFNFPDTSFAWAFVLVLL AAALAARKSIAWWILVGYMIAALGWNVGDLLSGDESWLEESGEVIGLAFHVAAIAFLVLARKEFWAKVRRGALIKAAATL VAGLVVGTLIGWGLLELFPGSLAREDRFFYALNRVGAFAGASADAFTGHPHVIVNALLGLFGALALMVAAIVLFQSQHAE NALTGEDESAIRGLLELYGKNDSLGYFATRRDKSVVFAPNGRAAVTYRVEVGVCLASGDPVGDPKAWPQAIEAWLALCGD YGWAPGVMGASSAGAEAFRASGLNALQLGDEAILYPDSFRLSGPDMRAVRQAVTRARRAGASVRIRRHRDLDADEMASVI ERADSWRDTDDERGFSMALGRLGDPADGDCLLVEAVQPGAGGDQVVAMLSLVPWGANGASLDLMRRSPQSPNGTIELMVS ELCMQAEGIGVTRVSLNFAMFRSAFEQGAQLGAGPIARLWRALLVFFSRWWQLETLYRSNMKYQPVWVPRYACYEDARLV PRVGVASVIAEGFLVLPFSRRHEQPHTGHHTAVPQSIVDSGLLHHDGTAPDVDQLQVGLDEEEQSRLPEQVRVRMAKLKA LQDSGIDAYPVGDEPSHTILAAVESEGAGTLTVAGRVLRIRDYGGVLFAQMRDWSGEVQLLLDNSQLEEGTTVDFTHAID LGDLIQVSGTMGYSKKGTRSLIVLSWRLIGKCLRPLPDKWKGLTDQEARVRARYVDLAINTEARDLIRARSGVLHAIRET LVGKGFLEVETPILQQIHGGANARPFLTHINAYDLDLYLRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNPEFTL LEAYQAHADYNVWIDGCRELIQNAALAANGAHVFMRPRDDGTLEPVDISGVWTVKTVHDAISEALGEQIGPETDLTTLRR LCDGAKIPYLTHWDTGAVVLELYEHLVEDRTEAPTFYKDFPTSVSPLTRPHRSIPGVAERWDLVAWGVELGTAYSELTDP VEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGVDRVVMLITGRSIRETLPFPLAKPR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS1 | YP_005682181.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 1e-153 | 44 |
| lysS1 | YP_005684273.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 4e-154 | 44 |
| lysX | YP_003784331.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 4e-154 | 44 |
| lysS1 | YP_005686365.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 4e-154 | 44 |
