Gene Information

Name : kdsB (BDGL_000947)
Accession : YP_004995215.1
Strain : Acinetobacter calcoaceticus PHEA-2
Genome accession: NC_016603
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 997826 - 998587 bp
Length : 762 bp
Strand : +
Note : -

DNA sequence :
ATGAAACACATCGTCATTCCAGCACGCTTCTCAAGTTCGCGTTTGCCAGGTAAACCATTGTTGCTTATTCATAACCGTCC
TATGATTTTACGTGTAGTGGATCAGGCAAAAAAAGTCGAAGGTTTTGATGATTTGTGCGTGGCAACAGATGACGAACGTA
TTGCTGAGATCTGCCGTGCAGATGGAATTGATGTAGTTCTTACCAGTGCTGATCATCCTTCGGGTACAGACCGTTTAAGT
GAGGTGGCTCGCATTAAGGGTTGGGATGCAGACGATATTATTGTAAATGTTCAAGGTGATGAACCTTTATTGCCAGCTCA
ACTTGTTCAGCAAGTTGCAAAACTTTTGGTTGATAAACCAAATTGTTCAATGTCGACGTTGTGTGAGCCGATTCATACTT
TAGATGAGTTCCAGCGTGACAGTATTGTAAAAGTAGTCATGTCTAAACAAAATGAAGCCTTATATTTTAGTAGGGCTACC
ATTCCTTATGATCGAGATGGGGCTAAGCATGATGAACCGACTTTACATTCACAAGCATTTCGTCATTTAGGTTTATATGC
TTATCGAGTGAACTTATTACAAGAATACGTAACATGGGATATGGGGAAGCTTGAAAAGTTGGAGAGCCTTGAACAATTAC
GTGTTTTGGAAAATGGTCATCGAATTGCAATTGCTGTAGCCGAAGCCAATTTGCCACCAGGTGTGGACACTCAAGCTGAT
CTTGATCGCTTAAATAGTATGCCTGTTGAATCTTTTGAATAA

Protein sequence :
MKHIVIPARFSSSRLPGKPLLLIHNRPMILRVVDQAKKVEGFDDLCVATDDERIAEICRADGIDVVLTSADHPSGTDRLS
EVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCEPIHTLDEFQRDSIVKVVMSKQNEALYFSRAT
IPYDRDGAKHDEPTLHSQAFRHLGLYAYRVNLLQEYVTWDMGKLEKLESLEQLRVLENGHRIAIAVAEANLPPGVDTQAD
LDRLNSMPVESFE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 1e-35 43
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 1e-35 43
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 2e-35 43